RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CDK5RAP3Q96JB5 506 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 CDCA3Q99618 268 aaPredicted RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 ZBP1Q9H171 429 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 TLE6Q9H808 572 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 CLDND1Q9NY35 253 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 KCNG1Q9UIX4 513 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 IRAK3Q9Y616 596 aa12.55□□□□□ -0.4
IGHV4-28-201ENST00000390612 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 C2orf71A6NGG8 1288 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 HIDE1A8MVS5 230 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 H3BQ06 376 aaPredicted RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 NRP1O14786 923 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 ALDH2P05091 517 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 PROZP22891 400 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 AKAP5P24588 427 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 DDIT3P35638 169 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 MLH1P40692 756 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 NRIP1P48552 1158 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 SCNN1GP51170 649 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 RNASELQ05823 741 aaKnown RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 DMP1Q13316 513 aaPredicted RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 MCM6Q14566 821 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 HACE1Q8IYU2 909 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 VN1R2Q8NFZ6 395 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 RAD54LQ92698 747 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMEM169Q96HH4 297 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 UHRF1Q96T88 793 aaPredicted RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 PHLPP2Q6ZVD8 1323 aa12.54□□□□□ -0.4
IGHV4-28-201ENST00000390612 ANK1P16157 1881 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 PTGESO14684 152 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 PER2O15055 1255 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 SLC16A4O15374 487 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 LILRB3O75022 631 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 CSPG5O95196 566 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 BRD1O95696 1058 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 CTSAP10619 480 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 COASYQ13057 564 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 GIT2Q14161 759 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 NAB2Q15742 525 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 SPECC1Q5M775 1068 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLPP4Q5VZY2 271 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 RBM23Q86U06 439 aaKnown RBP12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 VPS52Q8N1B4 723 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 MICAL1Q8TDZ2 1067 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 NECAB3Q96P71 396 aaPredicted RBP12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 FIZ1Q96SL8 496 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 APOL6Q9BWW8 343 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 CXCL16Q9H2A7 254 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 DOCK6Q96HP0 2047 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
IGHV4-28-201ENST00000390612 RECQL4O94761 1208 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 CXCL14O95715 111 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZSCAN22P10073 491 aaPredicted RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 NCKAP1LP55160 1127 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 GRIK3Q13003 919 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 XKR4Q5GH76 650 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 FAM178BQ8IXR5 827 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 FAM193BQ96PV7 902 aaPredicted RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 TARS2Q9BW92 718 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 CDT1Q9H211 546 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 ENTPD7Q9NQZ7 604 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 STK17AQ9UEE5 414 aa12.52□□□□□ -0.41
IGHV4-28-201ENST00000390612 STK39Q9UEW8 545 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms