RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 SLC17A8Q8NDX2 589 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 NEK9Q8TD19 979 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 BORCS6Q96GS4 357 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 LXNQ9BS40 222 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 SEMA4AQ9H3S1 761 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 ERVK-5Q9HDB9 667 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 OSGEPQ9NPF4 335 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 MRPL11Q9Y3B7 192 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 FOXO6A8MYZ6 492 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 CES2O00748 559 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 TRIM49P0CI25 452 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 TRIM49CP0CI26 452 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 ZBTB48P10074 688 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 FGFR4P22455 802 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 FAM186BQ8IYM0 893 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 SH3GL3Q99963 347 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 WDR11Q9BZH6 1224 aa19.01■□□□□ 0.63
SQSTM1-202ENST00000389805 GFPT2O94808 682 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 GRIPAP1Q4V328 841 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
SQSTM1-202ENST00000389805 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 TCP11X1B4DZS4 312 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 TISP43B9A030 160 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 SNX3O60493 162 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 TBC1D10BQ4KMP7 808 aaPredicted RBP19■□□□□ 0.63
SQSTM1-202ENST00000389805 ZNF341Q9BYN7 854 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 PABPC3Q9H361 631 aaKnown RBP19■□□□□ 0.63
SQSTM1-202ENST00000389805 STK24Q9Y6E0 443 aa19■□□□□ 0.63
SQSTM1-202ENST00000389805 LINGO3P0C6S8 592 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CCND1P24385 295 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 DR1Q01658 176 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 MKRN4PQ13434 485 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 TAF11Q15544 211 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 IFI16Q16666 785 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CBWD6Q4V339 395 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CBWD3Q5JTY5 395 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CBWD5Q5RIA9 395 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 AADACL2Q6P093 401 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 U2AF1L4Q8WU68 220 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 METTL14Q9HCE5 456 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 DAAM1Q9Y4D1 1078 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 TMEM150BA6NC51 233 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 CREB1P16220 341 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 DPEP1P16444 411 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 GAP43P17677 238 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 GNPTABQ3T906 1256 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 TXLNGYQ9BZA5 131 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 LRRN2O75325 713 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 KRT13P13646 458 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 ATP2A2P16615 1042 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 RXRBP28702 533 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 MSH2P43246 934 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 NT5DC3Q86UY8 548 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 NACC1Q96RE7 527 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 NSRP1Q9H0G5 558 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 ADAM22Q9P0K1 906 aa18.99■□□□□ 0.63
SQSTM1-202ENST00000389805 EGFRP00533 1210 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 ABCB4P21439 1286 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 PSMC2P35998 433 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 NUGGCQ68CJ6 796 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 DAW1Q8N136 415 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 ANKRD42Q8N9B4 389 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 OSBPL1AQ9BXW6 950 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 KCNH7Q9NS40 1196 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 ZNF536O15090 1300 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 WNT10BO00744 389 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 HIP1RO75146 1068 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 ALADP13716 330 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 KCNA3P22001 575 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 COPS2P61201 443 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 ZDHHC18Q9NUE0 388 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 STK32BQ9NY57 414 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 SYNPO2Q9UMS6 1093 aa18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 USP15Q9Y4E8 981 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-202ENST00000389805 SLC16A3O15427 465 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 H2AFZP0C0S5 128 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 ADCY2Q08462 1091 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 H2AFVQ71UI9 128 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 CCDC25Q86WR0 208 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 RASGEF1CQ8N431 466 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 GDAP1Q8TB36 358 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 SEC14L1Q92503 715 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 ERP44Q9BS26 406 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 TEKT3Q9BXF9 490 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 RAB17Q9H0T7 212 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 PCIF1Q9H4Z3 704 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 AGPAT3Q9NRZ7 376 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 PPP1R9AQ9ULJ8 1098 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 CORO1CQ9ULV4 474 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 DDX3XO00571 662 aaKnown RBP eCLIP18.97■□□□□ 0.633e-52■■■□□ 17.8
SQSTM1-202ENST00000389805 JAM2P57087 298 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 RNASELQ05823 741 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 ADCY1Q08828 1119 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 BLMHQ13867 455 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 PGM2Q96G03 612 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 PLCD4Q9BRC7 762 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms