RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 CFAP36Q96G28 342 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SPON2Q9BUD6 331 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 HEMGNQ9BXL5 484 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
PKP4-201ENST00000389757 PAMP19021 973 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 DPYDQ12882 1025 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 MOXD1Q6UVY6 613 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 NOP9Q86U38 636 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 DCLK2Q8N568 766 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 PDCD6IPQ8WUM4 868 aaKnown RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SIK2Q9H0K1 926 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 BCAP29Q9UHQ4 241 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 CYP11B2P19099 503 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 RASSF2P50749 326 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 EDRF1Q3B7T1 1238 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SV2CQ496J9 727 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 C17orf75Q9HAS0 396 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 CYP26B1Q9NR63 512 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 DISP2A7MBM2 1401 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 TTC26A0AVF1 554 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 H3BRJ5 948 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SKIP12755 728 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 DSG3P32926 999 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SHMT1P34896 483 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 ATP1A2P50993 1020 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 RAD51Q06609 339 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 PYROXD1Q8WU10 500 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
PKP4-201ENST00000389757 VPS39Q96JC1 886 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 PARVAQ9NVD7 372 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 EHD2Q9NZN4 543 aa10.94□□□□□ -0.66
PKP4-201ENST00000389757 CYP26A1O43174 497 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 MT-ND3P03897 115 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 STAG3L1P0CL83 205 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 OR1G1P47890 313 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 IL9RQ01113 521 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 KRT33BQ14525 404 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 TRIM42Q8IWZ5 723 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 DCP1BQ8IZD4 617 aaKnown RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 DHX35Q9H5Z1 703 aaKnown RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 SP110Q9HB58 689 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 ZMYND10O75800 440 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 CA4P22748 312 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 SREBF1P36956 1147 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 GNGT1P63211 74 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 ZC2HC1CQ53FD0 456 aaPredicted RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 PDXDC1Q6P996 788 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 PODXLO00592 558 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 PRRG1O14668 218 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 TEX33O43247 280 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 CTDNEP1O95476 244 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 NPTXRO95502 500 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 PCSK1P29120 753 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 FMO5P49326 533 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 TMED2Q15363 201 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 DEPDC1BQ8WUY9 529 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 DDX56Q9NY93 547 aaKnown RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 CYBBP04839 570 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 STK4Q13043 487 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 RBBP5Q15291 538 aaKnown RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 ACCSLQ4AC99 568 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 RHOT1Q8IXI2 618 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 FAM71BQ8TC56 605 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 MORC4Q8TE76 937 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 CDCA5Q96FF9 252 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 AGPAT1Q99943 283 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 APEX2Q9UBZ4 518 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 MOSPD1Q9UJG1 213 aa10.93□□□□□ -0.66
PKP4-201ENST00000389757 LSM7Q9UK45 103 aaKnown RBP10.93□□□□□ -0.66
PKP4-201ENST00000389757 CLGNO14967 610 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 EXTL3O43909 919 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 SUPT20HL2P0C7V6 817 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 ARHGAP25P42331 645 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 BCAR1P56945 870 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 DCAF4L1Q3SXM0 396 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 FMO2Q99518 471 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 TARS2Q9BW92 718 aaKnown RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 AAASQ9NRG9 546 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 EXOC1LA0A1B0GW35 172 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 CCDC160A6NGH7 325 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 GPR182O15218 404 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 RPLP2P05387 115 aaKnown RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 CLTAP09496 248 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 PPATQ06203 517 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 CACNB2Q08289 660 aaPredicted RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 SPOPLQ6IQ16 392 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 APOBEC3HQ6NTF7 200 aaKnown RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 RNF10Q8N5U6 811 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms