RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 GDF9O60383 454 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 ERLIN2O94905 339 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 STBD1O95210 358 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 C8AP07357 584 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 CDC27P30260 824 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 HOXA11P31270 313 aaPredicted RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 CIITAP33076 1130 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 NRLP54845 237 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 PFKFB3Q16875 520 aaPredicted RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 CREB3L3Q68CJ9 461 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 LAIR1Q6GTX8 287 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 CNNM3Q8NE01 707 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 NELL1Q92832 810 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 TMEM143Q96AN5 459 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 CLDN23Q96B33 292 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 LENG9Q96B70 501 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 MCRS1Q96EZ8 462 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 CEP89Q96ST8 783 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 RIT2Q99578 217 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 SH2B1Q9NRF2 756 aaPredicted RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 SEMA4GQ9NTN9 838 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 MRPS17Q9Y2R5 130 aaKnown RBP10.79□□□□□ -0.68
IFT88-203ENST00000389373 IPPQ9Y573 584 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 MIA3Q5JRA6 1907 aa10.79□□□□□ -0.68
IFT88-203ENST00000389373 KMT2BQ9UMN6 2715 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 KLF18A0A0U1RQI7 1052 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 XYLBO75191 536 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 EFEMP2O95967 443 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 RETP07949 1114 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 HNRNPA1P09651 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
IFT88-203ENST00000389373 GNA11P29992 359 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 RPS9P46781 194 aaKnown RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 NPEPPSP55786 919 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 CREMQ03060 361 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 DSC1Q08554 894 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 ADCY1Q08828 1119 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 SIM2Q14190 667 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 HASPINQ8TF76 798 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 CCDC12Q8WUD4 166 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 SLC5A5Q92911 643 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 MBOAT7Q96N66 472 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 FAM126AQ9BYI3 521 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 PLA2G2FQ9BZM2 168 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 PRMT8Q9NR22 394 aaPredicted RBP10.78□□□□□ -0.68
IFT88-203ENST00000389373 HCFC1R1Q9NWW0 138 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 ADAM28Q9UKQ2 775 aa10.78□□□□□ -0.68
IFT88-203ENST00000389373 CEP250Q9BV73 2442 aa10.77□□□□□ -0.68
IFT88-203ENST00000389373 DOCK8Q8NF50 2099 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 PAPLNO95428 1278 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 C1RP00736 705 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 AKAP5P24588 427 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 LAMTOR4Q0VGL1 99 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 FZD5Q13467 585 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 AAMPQ13685 434 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 PPP2R5DQ14738 602 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 RTP2Q5QGT7 225 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 N4BP2L1Q5TBK1 243 aaPredicted RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 ANO5Q75V66 913 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 RDM1Q8NG50 284 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 PSPC1Q8WXF1 523 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 CEP170P1Q96L14 293 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 LMAN1LQ9HAT1 526 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 KLK14Q9P0G3 267 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 PARP2Q9UGN5 583 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 FBXW11Q9UKB1 542 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 MRPS23Q9Y3D9 190 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 TPRP12270 2363 aaKnown RBP10.77□□□□□ -0.69
IFT88-203ENST00000389373 FRYLO94915 3013 aa10.77□□□□□ -0.69
IFT88-203ENST00000389373 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 ESYT2A0FGR8 921 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 EDIL3O43854 480 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 PSMD10O75832 226 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 PSMC5P62195 406 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 AKAP17AQ02040 695 aaKnown RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 SRSF5Q13243 272 aaKnown RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 GRM2Q14416 872 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms