RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
PDGFB-202ENST00000381551 APBB1IPQ7Z5R6 666 aaPredicted RBP16.92■□□□□ 0.3
PDGFB-202ENST00000381551 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
PDGFB-202ENST00000381551 TRIM6Q9C030 488 aaPredicted RBP16.92■□□□□ 0.3
PDGFB-202ENST00000381551 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
PDGFB-202ENST00000381551 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
PDGFB-202ENST00000381551 TMEM161AQ9NX61 479 aa16.92■□□□□ 0.3
PDGFB-202ENST00000381551 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
PDGFB-202ENST00000381551 IPPQ9Y573 584 aa16.92■□□□□ 0.3
PDGFB-202ENST00000381551 PDXKO00764 312 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 UPP2O95045 317 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
PDGFB-202ENST00000381551 ZNF568Q3ZCX4 644 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
PDGFB-202ENST00000381551 NPAS4Q8IUM7 802 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 TDHQ8IZJ6 230 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 PGBD4Q96DM1 585 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 SLC9A7Q96T83 725 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 SEMA6BQ9H3T3 888 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 HES2Q9Y543 173 aa16.91■□□□□ 0.3
PDGFB-202ENST00000381551 MEIS3P2A8K0S8 358 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 STAG3L1P0CL83 205 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 ATP2A2P16615 1042 aaKnown RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 GARTP22102 1010 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 NLRP12P59046 1061 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 NOLC1Q14978 699 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 CENPPQ6IPU0 288 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 HERC6Q8IVU3 1022 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 POMGNT1Q8WZA1 660 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 LPPQ93052 612 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 DHTKD1Q96HY7 919 aaPredicted RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 CBWD1Q9BRT8 395 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 MSTO1Q9BUK6 570 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 AGPAT3Q9NRZ7 376 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 TYW1Q9NV66 732 aaKnown RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 SNTG2Q9NY99 539 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 CGNQ9P2M7 1197 aaKnown RBP16.9■□□□□ 0.3
PDGFB-202ENST00000381551 LRFN2Q9ULH4 789 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 TRAF3IP3Q9Y228 551 aa16.9■□□□□ 0.3
PDGFB-202ENST00000381551 RANBP2P49792 3224 aaKnown RBP16.89■□□□□ 0.29
PDGFB-202ENST00000381551 CLIC2O15247 247 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 FAM189A1O60320 539 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 DGKIO75912 1065 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 GJB5O95377 273 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 HARSP12081 509 aaKnown RBP16.89■□□□□ 0.29
PDGFB-202ENST00000381551 ITGA4P13612 1032 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 AKAP5P24588 427 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 PPP1R2P41236 205 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 GRM5P41594 1212 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 SEZ6Q53EL9 994 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 AGMOQ6ZNB7 445 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 CEP120Q8N960 986 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 MLKLQ8NB16 471 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 RNF169Q8NCN4 708 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 GOLGA5Q8TBA6 731 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 RNF19AQ9NV58 838 aa16.89■□□□□ 0.29
PDGFB-202ENST00000381551 AGO2Q9UKV8 859 aaKnown RBP16.89■□□□□ 0.29
PDGFB-202ENST00000381551 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
PDGFB-202ENST00000381551 OGTO15294 1046 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 LETM1O95202 739 aaPredicted RBP16.88■□□□□ 0.29
PDGFB-202ENST00000381551 STIM1Q13586 685 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 FAM109BQ6ICB4 259 aaPredicted RBP16.88■□□□□ 0.29
PDGFB-202ENST00000381551 FAM117BQ6P1L5 589 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 HACE1Q8IYU2 909 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 APOL6Q9BWW8 343 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 PCIF1Q9H4Z3 704 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 UBN1Q9NPG3 1134 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 GIT1Q9Y2X7 761 aa16.88■□□□□ 0.29
PDGFB-202ENST00000381551 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 A0A1W2PPC1 479 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 GRXCR1A8MXD5 290 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 PSMA7O14818 248 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 KIAA0391O15091 583 aaKnown RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 OFD1O75665 1012 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CLTAP09496 248 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 FGFR1P11362 822 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CCNE1P24864 410 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ACOT2P49753 483 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 OSTNP61366 133 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 MYBPC2Q14324 1141 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 KYAT1Q16773 422 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 DPCR1Q3MIW9 517 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CLLU1OSQ5K130 101 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ANKRD40Q6AI12 368 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms