RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TAS2R14Q9NYV8 317 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 IGSF9BQ9UPX0 1349 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 SPOPO43791 374 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 LUC7L3O95232 432 aaKnown RBP14.85□□□□□ -0.03
SDC1-202ENST00000381150 AGTP01019 485 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ABCB5Q2M3G0 1257 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ARSHQ5FYA8 562 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 CYP4F22Q6NT55 531 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 DTX3LQ8TDB6 740 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ALG3Q92685 438 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 KRT35Q92764 455 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 RPS6KC1Q96S38 1066 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 NT5C3AQ9H0P0 336 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ARL2BPQ9Y2Y0 163 aa14.85□□□□□ -0.03
SDC1-202ENST00000381150 ENTPD3O75355 529 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 ENTPD5O75356 428 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 MED24O75448 989 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 TUBP50607 506 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 PAPOLAP51003 745 aaKnown RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 AUHQ13825 339 aaKnown RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 KYNUQ16719 465 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 BTNL9Q6UXG8 535 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 C1orf54Q8WWF1 131 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 SYN2Q92777 582 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 BTBD6Q96KE9 485 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 GANQ9H2C0 597 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 TNS1Q9HBL0 1735 aaKnown RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 PSME4Q14997 1843 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 COL2A1P02458 1487 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 WDR91A4D1P6 747 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 SLC26A4O43511 780 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 RFC5P40937 340 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 ARHGAP4P98171 946 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 MAPK7Q13164 816 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 DNAJC3Q13217 504 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 AP3B2Q13367 1082 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 RNF220Q5VTB9 566 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 SUCLA2Q9P2R7 463 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 ANKRD63C9JTQ0 380 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 CYP11B2P19099 503 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 GJC1P36383 396 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 RANBP1P43487 201 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 RWDD2BP57060 319 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 KCNA1Q09470 495 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 NAP1L3Q99457 506 aaPredicted RBP14.84□□□□□ -0.03
SDC1-202ENST00000381150 AMNQ9BXJ7 453 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 KDM3AQ9Y4C1 1321 aa14.84□□□□□ -0.03
SDC1-202ENST00000381150 THAP12O43422 761 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 CBX6O95503 412 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 GNA14O95837 355 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 CYP2J2P51589 502 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 SLC12A3P55017 1021 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 INHBEP58166 350 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 PTENP60484 403 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 BLMHQ13867 455 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 Q4G0T1 1027 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 NSMFQ6X4W1 530 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 APBB1IPQ7Z5R6 666 aaPredicted RBP14.83□□□□□ -0.03
SDC1-202ENST00000381150 TTC8Q8TAM2 541 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 SPOCK2Q92563 424 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 TRIM4Q9C037 500 aa14.83□□□□□ -0.03
SDC1-202ENST00000381150 CORO1CQ9ULV4 474 aaPredicted RBP14.83□□□□□ -0.03
SDC1-202ENST00000381150 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 FAM86B1E9PN63 330 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 IRF6O14896 467 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 KIAA0391O15091 583 aaKnown RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 FAM86B2P0C5J1 330 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 SPATA31C1P0DKV0 1188 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 RIPK1Q13546 671 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 CTTNQ14247 550 aaKnown RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 DUPD1Q68J44 220 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 CDCA2Q69YH5 1023 aaPredicted RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 PALB2Q86YC2 1186 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 PGM2Q96G03 612 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 KCTD10Q9H3F6 313 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 BZW2Q9Y6E2 419 aaKnown RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 RPTORQ8N122 1335 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 RIPK2O43353 540 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 AKAP3O75969 853 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 GH2P01242 217 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 TRIM49P0CI25 452 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 TRIM49CP0CI26 452 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 TAL1P17542 331 aaPredicted RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 EPHB2P29323 1055 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 SSR1P43307 286 aaKnown RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 EAPPQ56P03 285 aaPredicted RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 SEL1L2Q5TEA6 688 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.04
SDC1-202ENST00000381150 SFR1Q86XK3 245 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 CATSPER3Q86XQ3 398 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 EPB41L4BQ9H329 900 aa14.83□□□□□ -0.04
SDC1-202ENST00000381150 MAP3K13O43283 966 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 DLATP10515 647 aaKnown RBP14.82□□□□□ -0.04
SDC1-202ENST00000381150 PECAM1P16284 738 aaPredicted RBP14.82□□□□□ -0.04
SDC1-202ENST00000381150 SREBF1P36956 1147 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 DRAP1Q14919 205 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms