RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SATB1Q01826 763 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 VPS36Q86VN1 386 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 ARHGEF19Q8IW93 802 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 GIMAP7Q8NHV1 300 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 ZC3H15Q8WU90 426 aaKnown RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 POMGNT1Q8WZA1 660 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 HVCN1Q96D96 273 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 OSBPL9Q96SU4 736 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 PCYT2Q99447 389 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 TLR10Q9BXR5 811 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 TMEM117Q9H0C3 514 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 GSTTP1A0A1W2PQM5 241 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 GJA5P36382 358 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 MXI1P50539 228 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 MAP2K1Q02750 393 aaPredicted RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 CKAP4Q07065 602 aaKnown RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 CETN1Q12798 172 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 EPC2Q52LR7 807 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 CREG2Q8IUH2 290 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 LNX1Q8TBB1 728 aaPredicted RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 U2AF1L4Q8WU68 220 aaKnown RBP15.41■□□□□ 0.06
CLCN4-201ENST00000380829 CABS1Q96KC9 395 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 CAPS2Q9BXY5 557 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
CLCN4-201ENST00000380829 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
CLCN4-201ENST00000380829 MAPK13O15264 365 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 EIF3HO15372 352 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLCN4-201ENST00000380829 GGPS1O95749 300 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 RPAINQ86UA6 219 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 GLYCTKQ8IVS8 523 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 SELENOOQ9BVL4 669 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 TOPORSQ9NS56 1045 aaPredicted RBP15.4■□□□□ 0.06
CLCN4-201ENST00000380829 EHD2Q9NZN4 543 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 ARHGAP28Q9P2N2 729 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 PACSIN2Q9UNF0 486 aaPredicted RBP15.4■□□□□ 0.06
CLCN4-201ENST00000380829 HYOU1Q9Y4L1 999 aa15.4■□□□□ 0.06
CLCN4-201ENST00000380829 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 ARIH2O95376 493 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 RTP1P59025 263 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 C10orf76Q5T2E6 689 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 ARMC9Q7Z3E5 817 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 ASAP3Q8TDY4 903 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 FGD4Q96M96 766 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 ZNF408Q9H9D4 720 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 NENFQ9UMX5 172 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 IGKV6D-21A0A0A0MT36 114 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 GRID2IPA4D2P6 1211 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 SLC25A27O95847 323 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 TCF7P36402 384 aaPredicted RBP15.39■□□□□ 0.05
CLCN4-201ENST00000380829 TUBB4BP68371 445 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 NEDD9Q14511 834 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 GPAT2Q6NUI2 795 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 N4BP2L2Q92802 583 aaPredicted RBP15.39■□□□□ 0.05
CLCN4-201ENST00000380829 KAT5Q92993 513 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 ELMO3Q96BJ8 720 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 FAM84AQ96KN4 292 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 GOLPH3Q9H4A6 298 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 TAF1DQ9H5J8 278 aaPredicted RBP15.39■□□□□ 0.05
CLCN4-201ENST00000380829 DHX33Q9H6R0 707 aaKnown RBP15.39■□□□□ 0.05
CLCN4-201ENST00000380829 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
CLCN4-201ENST00000380829 P4HA2O15460 535 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 DLATP10515 647 aaKnown RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 CYP2C8P10632 490 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 FNTAP49354 379 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 PTPROQ16827 1216 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 FASTKD5Q7L8L6 764 aaKnown RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 SLC7A3Q8WY07 619 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 MMP19Q99542 508 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 FAM213AQ9BRX8 229 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 SEPT11Q9NVA2 429 aaKnown RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 GOLGA6BA6NDN3 693 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 GLTPD2A6NH11 291 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 LRRIQ4A6NIV6 560 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 PRLRP16471 622 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 TCP1P17987 556 aaKnown RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 OSBPP22059 807 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 GLRA2P23416 452 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 ANXA13P27216 316 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 MARK3P27448 753 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 STAT5BP51692 787 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 KCTD2Q14681 263 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 BRDTQ58F21 947 aaPredicted RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 FBXO16Q8IX29 292 aaPredicted RBP15.38■□□□□ 0.05
CLCN4-201ENST00000380829 PORCNQ9H237 461 aa15.38■□□□□ 0.05
CLCN4-201ENST00000380829 H2AFZP0C0S5 128 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 ELF1P32519 619 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 LIG4P49917 911 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 CYP24A1Q07973 514 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 METTL7BQ6UX53 244 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 H2AFVQ71UI9 128 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 TRIM50Q86XT4 487 aa15.37■□□□□ 0.05
CLCN4-201ENST00000380829 PALB2Q86YC2 1186 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms