RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 STAT4Q14765 748 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
COL2A1-202ENST00000380518 ATL2Q8NHH9 583 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 NCLNQ969V3 563 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
COL2A1-202ENST00000380518 ARHGDIAP52565 204 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 CDH6P55285 790 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 NCAPHQ15003 741 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 TMEM247A6NEH6 219 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 A8MXQ7 604 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 KITP10721 976 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 DPYDQ12882 1025 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 E4F1Q66K89 784 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-202ENST00000380518 CHP1Q99653 195 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 H3BRJ5 948 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 KRT17Q04695 432 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 POU5F1BQ06416 359 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 NSUN2Q08J23 767 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL2A1-202ENST00000380518 HABP4Q5JVS0 413 aaKnown RBP17.01■□□□□ 0.31
COL2A1-202ENST00000380518 ELMSAN1Q6PJG2 1045 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 STK33Q9BYT3 514 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 RGL1Q9NZL6 768 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 CFAP73A6NFT4 308 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 CYP26A1O43174 497 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.31
COL2A1-202ENST00000380518 LRRC14Q15048 493 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 KYAT1Q16773 422 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF609O15014 1411 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 E2F6O75461 281 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 IFNA8P32881 189 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 COPB2P35606 906 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 ANGPTL8Q6UXH0 198 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 TYK2P29597 1187 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 ARSEP51690 589 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 CCZ1BP86790 482 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 CCZ1P86791 482 aaPredicted RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 BYSLQ13895 437 aaKnown RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 RASGRP2Q7LDG7 609 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 ULK4Q96C45 1275 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 SPATA33Q96N06 139 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 UVRAGQ9P2Y5 699 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
COL2A1-202ENST00000380518 YWHABP31946 246 aaKnown RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 RNF219Q5W0B1 726 aaPredicted RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 SYDE1Q6ZW31 735 aaPredicted RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 EIF2AQ9BY44 585 aaKnown RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 IRX2Q9BZI1 471 aaPredicted RBP17■□□□□ 0.31
COL2A1-202ENST00000380518 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 CCDC22O60826 627 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 PDCD6IPQ8WUM4 868 aaKnown RBP16.99■□□□□ 0.31
COL2A1-202ENST00000380518 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 TBX3O15119 743 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 AP1B1Q10567 949 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 HIF1AQ16665 826 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 POLR3CQ9BUI4 534 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-202ENST00000380518 SLC13A1Q9BZW2 595 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 APEX2Q9UBZ4 518 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 CCDC195A0A1B0GUA6 201 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 SLC26A4O43511 780 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 NFIXQ14938 502 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-202ENST00000380518 TSC22D3Q99576 134 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 VIPAS39Q9H9C1 493 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 PRAMEP78395 509 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 TMEM259Q4ZIN3 620 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 RNF217Q8TC41 542 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
COL2A1-202ENST00000380518 JPH1Q9HDC5 661 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-202ENST00000380518 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 PPP1R37O75864 691 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 DGAT1O75907 488 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ADORA2BP29275 332 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ACTR2P61160 394 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ZBTB41Q5SVQ8 909 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 AP2B1P63010 937 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 SNX19Q92543 992 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 FAM161BQ96MY7 647 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 NDE1Q9NXR1 346 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 CSPG5O95196 566 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 KRT33BQ14525 404 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 NR1I3Q14994 352 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ICE2Q659A1 982 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ZNF668Q96K58 619 aaPredicted RBP16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ING2Q9H160 280 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms