RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LIG4P49917 911 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 PAK2Q13177 524 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 NEDD9Q14511 834 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 TCEAL1Q15170 157 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 TREML2Q5T2D2 321 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SLC39A4Q6P5W5 647 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SEPT14Q6ZU15 432 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 RASGEF1CQ8N431 466 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SCFD2Q8WU76 684 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SLC7A3Q8WY07 619 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SHC3Q92529 594 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 CAVIN3Q969G5 261 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 NRBP2Q9NSY0 501 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SYNGAP1Q96PV0 1343 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 TRIM66O15016 1216 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 BUB1BO60566 1050 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 NAMPTP43490 491 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 SOX10P56693 466 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 CNTN2Q02246 1040 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 SND1Q7KZF4 910 aaKnown RBP eCLIP13.6□□□□□ -0.23
VPS16-202ENST00000380445 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 MYCBPQ99417 103 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 NAP1L3Q99457 506 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 NIFKQ9BYG3 293 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 OSGEPQ9NPF4 335 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 ADGRA3Q8IWK6 1321 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 TULP1O00294 542 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 EXTL3O43909 919 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 FTLP02792 175 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 RFC5P40937 340 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GYS2P54840 703 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 GPC5P78333 572 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 FAM160B1Q5W0V3 765 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 SLFN12LQ6IEE8 588 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 GOLGA6L1Q8N7Z2 621 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 EPS8L1Q8TE68 723 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 PORCNQ9H237 461 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 DHX33Q9H6R0 707 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 TTC7AQ9ULT0 858 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GOLGA6BA6NDN3 693 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 EDNRBP24530 442 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GUCY2DQ02846 1103 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 NCAPG2Q86XI2 1143 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 GDAP1L1Q96MZ0 367 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
VPS16-202ENST00000380445 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
VPS16-202ENST00000380445 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 CXCL11O14625 94 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 SORBS3O60504 671 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 GLI1P08151 1106 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 NF2P35240 595 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 COPB2P35606 906 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 PDE6CP51160 858 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 EP400NLQ6ZTU2 488 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 FNBP1Q96RU3 617 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 CARD9Q9H257 536 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 MIF4GDA9UHW6 222 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 K7ERI5 159 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 KRIT1O00522 736 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 SGPL1O95470 568 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 SLC25A27O95847 323 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 GCNT1Q02742 428 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 ALS2CLQ60I27 953 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 HELQQ8TDG4 1101 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 NCAPGQ9BPX3 1015 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms