RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 CCDC105Q8IYK2 499 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 DAW1Q8N136 415 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 GDAP1Q8TB36 358 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 MKL1Q969V6 931 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 ROPN1BQ9BZX4 212 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 NSRP1Q9H0G5 558 aaKnown RBP10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 ROPN1Q9HAT0 212 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 PARVGQ9HBI0 331 aa10.05□□□□□ -0.8
NHLRC3-202ENST00000379600 GBP1P32455 592 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SCNN1DP51172 638 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SLFN13Q68D06 897 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 TRMT10CQ7L0Y3 403 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 TAOK1Q7L7X3 1001 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SPATA21Q7Z572 469 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 LRRC19Q9H756 370 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 DNAJC17Q9NVM6 304 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 PCDHAC2Q9Y5I4 1007 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 EMSYQ7Z589 1322 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 NEBLO76041 1014 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CCNB1P14635 433 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 FOXN2P32314 431 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ABL2P42684 1182 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ZKSCAN8Q15776 578 aaPredicted RBP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 RNF207Q6ZRF8 634 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ECHDC2Q86YB7 292 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ANKRD42Q8N9B4 389 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CERKQ8TCT0 537 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CCHCR1Q8TD31 782 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 C1orf54Q8WWF1 131 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 RSRC1Q96IZ7 334 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 WNT8AQ9H1J5 351 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 RXFP1Q9HBX9 757 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SLC24A3Q9HC58 644 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CLDN3O15551 220 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CHMP2AO43633 222 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 PSMD10O75832 226 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 MSH2P43246 934 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CCNHP51946 323 aaPredicted RBP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SEL1L2Q5TEA6 688 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CROCCP2Q86T23 111 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 DCAF4Q8WV16 495 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ATG4AQ8WYN0 398 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SLCO2A1Q92959 643 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 KLHL29Q96CT2 875 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 SERPINB12Q96P63 405 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 CHST7Q9NS84 486 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 HOMER3Q9NSC5 361 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 FRMD4BQ9Y2L6 1034 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 ARL2BPQ9Y2Y0 163 aa10.04□□□□□ -0.8
NHLRC3-202ENST00000379600 PASKQ96RG2 1323 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SUN1O94901 812 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 CYP3A4P08684 503 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 JAG1P78504 1218 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 KRT17Q04695 432 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SYDE2Q5VT97 1194 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 APOBEC3HQ6NTF7 200 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SLC47A2Q86VL8 602 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 AMNQ9BXJ7 453 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 TRIM6Q9C030 488 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 STMN4Q9H169 189 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 EURLQ9NYK6 297 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 NKX1-2Q9UD57 310 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 STK38LQ9Y2H1 464 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 LY75O60449 1722 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 O00370 1275 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 CYP1A2P05177 515 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 CCND1P24385 295 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 FMO1Q01740 532 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SNX1Q13596 522 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 KYNUQ16719 465 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 FAM178BQ8IXR5 827 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 RPGRQ92834 1020 aaKnown RBP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 NUP85Q9BW27 656 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 TUFT1Q9NNX1 390 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 WHRNQ9P202 907 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 NRXN2Q9P2S2 1712 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 UBE4BO95155 1302 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 FSCN2O14926 492 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 SMNDC1O75940 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 ECEL1O95672 775 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 TTC4O95801 387 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 PDE6BP35913 854 aa10.03□□□□□ -0.8
NHLRC3-202ENST00000379600 GCLMP48507 274 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms