RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 OFD1O75665 1012 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 CASP1P29466 404 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 LIG4P49917 911 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 ERVK-21P61565 698 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 DPYDQ12882 1025 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 ZNF568Q3ZCX4 644 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 LRRC43Q8N309 656 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 HELQQ8TDG4 1101 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 LPPQ93052 612 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 TMEM206Q9H813 350 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
CKAP2-202ENST00000378034 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 ABLIM1O14639 778 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 CLDN3O15551 220 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
CKAP2-202ENST00000378034 NR1I2O75469 434 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 GATMP50440 423 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 MCL1Q07820 350 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 POSTNQ15063 836 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 KYAT1Q16773 422 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 SLFN12LQ6IEE8 588 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 URGCPQ8TCY9 931 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 CDT1Q9H211 546 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 TTYH1Q9H313 450 aaPredicted RBP14.5□□□□□ -0.09
CKAP2-202ENST00000378034 SEMA6BQ9H3T3 888 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 NXF3Q9H4D5 531 aaKnown RBP14.5□□□□□ -0.09
CKAP2-202ENST00000378034 EXOC1Q9NV70 894 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 UBE4BO95155 1302 aa14.5□□□□□ -0.09
CKAP2-202ENST00000378034 RPN1P04843 607 aaKnown RBP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 MYBP10242 640 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 GRM5P41594 1212 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 NOLC1Q14978 699 aaKnown RBP eCLIP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 PAN2Q504Q3 1202 aaKnown RBP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 EPM2AIP1Q7L775 607 aaPredicted RBP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 CCDC94Q9BW85 323 aaPredicted RBP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 AAASQ9NRG9 546 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 HES2Q9Y543 173 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 MRPL42Q9Y6G3 142 aaKnown RBP14.49□□□□□ -0.09
CKAP2-202ENST00000378034 STYXL1Q9Y6J8 313 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 MEIS3P2A8K0S8 358 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 GOLGA6L22H0YM25 854 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 ARHGEF15O94989 841 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 RB1P06400 928 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 CASP5P51878 434 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 KCNB1Q14721 858 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 KMT5BQ4FZB7 885 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 NLRC5Q86WI3 1866 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 ZNF507Q8TCN5 953 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 PLVAPQ9BX97 442 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 ANKFY1Q9P2R3 1169 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 PARP2Q9UGN5 583 aa14.49□□□□□ -0.09
CKAP2-202ENST00000378034 RHOBTB3O94955 611 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 SMC2O95347 1197 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 LINC00271P0C7V0 271 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 MATR3P43243 847 aaKnown RBP eCLIP14.48□□□□□ -0.09
CKAP2-202ENST00000378034 ZBTB33Q86T24 672 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 TMEM192Q8IY95 271 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 SYCP3Q8IZU3 236 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 ZBTB45Q96K62 511 aaPredicted RBP14.48□□□□□ -0.09
CKAP2-202ENST00000378034 APOL6Q9BWW8 343 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 FGFBP2Q9BYJ0 223 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
CKAP2-202ENST00000378034 SNTG2Q9NY99 539 aa14.48□□□□□ -0.09
CKAP2-202ENST00000378034 A0A0B4J269 797 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 ARL5CA6NH57 179 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 C5orf67F2Z3F1 127 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 PRPF6O94906 941 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 LAG3P18627 525 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 AKAP5P24588 427 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 BMPR1AP36894 532 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 YARSP54577 528 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 SNRPFP62306 86 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 BMT2Q1RMZ1 405 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 LRRC55Q6ZSA7 311 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 HPS3Q969F9 1004 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 GAD1Q99259 594 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 GTPBP4Q9BZE4 634 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 CWH43Q9H720 699 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 TOPORSQ9NS56 1045 aaPredicted RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 TBC1D13Q9NVG8 400 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 RMND1Q9NWS8 449 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 LAMA2P24043 3122 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 KIAA1671Q9BY89 1806 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 OGTO15294 1046 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 RECQL4O94761 1208 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 KIF20AO95235 890 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 MLH1P40692 756 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 RNASELQ05823 741 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 KCNA1Q09470 495 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 EPC2Q52LR7 807 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 SPOUT1Q5T280 376 aaKnown RBP14.47□□□□□ -0.09
CKAP2-202ENST00000378034 SLC39A4Q6P5W5 647 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 P2RX5Q93086 422 aa14.47□□□□□ -0.09
CKAP2-202ENST00000378034 ACAP3Q96P50 834 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms