RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 CDK8P49336 464 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 TRIP10Q15642 601 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 DDB1Q16531 1140 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 RARS2Q5T160 578 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 DNAJC24Q6P3W2 148 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 LVRNQ6Q4G3 990 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 KCTD1Q719H9 257 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 SLC13A5Q86YT5 568 aaPredicted RBP9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 PLA2G12BQ9BX93 195 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 CDC42EP4Q9H3Q1 356 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 ADAM22Q9P0K1 906 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 GGA1Q9UJY5 639 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 CHMP2BQ9UQN3 213 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
CRNKL1-201ENST00000377327 GRIN2DO15399 1336 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 GOLGA8QA0A0J9YX86 632 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 GOLGA8OA6NCC3 632 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 GOLGA8NF8WBI6 632 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 LIN7AO14910 233 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 MGRN1O60291 552 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 GPC4O75487 556 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 GARSP41250 739 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 STAT2P52630 851 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 NOP14P78316 857 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 PKN1Q16512 942 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 BRDTQ58F21 947 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 XKR9Q5GH70 373 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 FSCBQ5H9T9 825 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 ZNF571Q7Z3V5 609 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CXorf38Q8TB03 319 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 SNRNP27Q8WVK2 155 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CCT6BQ92526 530 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 PSMC3IPQ9P2W1 217 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 KCNG1Q9UIX4 513 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 NEURL4Q96JN8 1562 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 A0A0A6YYK5 440 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 SLC16A3O15427 465 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CSF1RP07333 972 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 WLSQ5T9L3 541 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 OSBPL8Q9BZF1 889 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 FAM192AQ9GZU8 254 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 UVRAGQ9P2Y5 699 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 HEY2Q9UBP5 337 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 NEU2Q9Y3R4 380 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 COL15A1P39059 1388 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 H3BRJ5 948 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 NOP56O00567 594 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 RIPK2O43353 540 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 APOEP02649 317 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 LIG4P49917 911 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 PEX5P50542 639 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 ARSEP51690 589 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 DARS2Q6PI48 645 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CFAP36Q96G28 342 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 RPS6KC1Q96S38 1066 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 WDR11Q9BZH6 1224 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 CYP39A1Q9NYL5 469 aa9.62□□□□□ -0.87
CRNKL1-201ENST00000377327 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 TMCC1O94876 653 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 SLC34A1Q06495 639 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 DMP1Q13316 513 aaPredicted RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 CTTNQ14247 550 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 HIF1AQ16665 826 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 SCYL2Q6P3W7 929 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 UNC5CO95185 931 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 HNRNPH3P31942 346 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 PIK3CAP42336 1068 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 FMO5P49326 533 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 P3H1Q32P28 736 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 MDH1BQ5I0G3 518 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 RINT1Q6NUQ1 792 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 MTDHQ86UE4 582 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 PPM1NQ8N819 430 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 XXYLT1Q8NBI6 393 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 TMEM237Q96Q45 408 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 ZSWIM1Q9BR11 485 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 ARHGEF10LQ9HCE6 1279 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 METTL5Q9NRN9 209 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 MCF2P10911 925 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 EPHB2P29323 1055 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 PRDX5P30044 214 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 CPA2P48052 419 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 YWHAEP62258 255 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 ALCAMQ13740 583 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 TRADDQ15628 312 aa9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-201ENST00000377327 LCA5Q86VQ0 697 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms