RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 KCNMB3Q9NPA1 279 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 KCNH7Q9NS40 1196 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NFIBO00712 420 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PHF2O75151 1096 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP2R5EQ16537 467 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP1R14CQ8TAE6 165 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ABCF3Q9NUQ8 709 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ADAM22Q9P0K1 906 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PODXLO00592 558 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DIAPH2O60879 1101 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 UBOX5O94941 541 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLMAPQ14BN4 828 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RUNDC3BQ96NL0 473 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CARD9Q9H257 536 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 C10orf88Q9H8K7 445 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CCT8L1PA6NM43 557 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DNM1LO00429 736 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SHOX2O60902 331 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ITGA8P53708 1063 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DNAJC3Q13217 504 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SNRNP35Q16560 246 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 BBS9Q3SYG4 887 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TMEM206Q9H813 350 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 COG5Q9UP83 839 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRAPPC3O43617 180 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MAP3K6O95382 1288 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 KRT1P04264 644 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RARAP10276 462 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MARK3P27448 753 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ATP5DP30049 168 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SWSAP1Q6NVH7 229 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MSL3Q8N5Y2 521 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CDC42EP4Q9H3Q1 356 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 QTRT2Q9H974 415 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GABBR1Q9UBS5 961 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PCSK1NQ9UHG2 260 aa15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TPX2Q9ULW0 747 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MIF4GDA9UHW6 222 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 YWHABP31946 246 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GCKP35557 465 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SREBF1P36956 1147 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 UBAP2Q5T6F2 1119 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SCYL2Q6P3W7 929 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 OTOP1Q7RTM1 612 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRPM8Q7Z2W7 1104 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLC13A5Q86YT5 568 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CCDC89Q8N998 374 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SGSM3Q96HU1 749 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZSWIM1Q9BR11 485 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 OSBPL7Q9BZF2 842 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CHST7Q9NS84 486 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PDHA1P08559 390 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RALAP11233 206 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NPR1P16066 1061 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ALDH3A1P30838 453 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 COILP38432 576 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DEPTORQ8TB45 409 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RAB20Q9NX57 234 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 A0A0G2JND7 137 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RRM1P23921 792 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PSMC4P43686 418 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRPC3Q13507 836 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 IZUMO3Q5VZ72 239 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PODNQ7Z5L7 613 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NOP9Q86U38 636 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ETNPPLQ8TBG4 499 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 LRRC8CQ8TDW0 803 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 MAGED2Q9UNF1 606 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZHX2Q9Y6X8 837 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 C4AP0C0L4 1744 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 C4BP0C0L5 1744 aa15.36■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ANKRD63C9JTQ0 380 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 LCA5LO95447 670 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PTENP60484 403 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 BASP1P80723 227 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TFAMQ00059 246 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GPS1Q13098 491 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ANKRD20A8PQ5CZ79 823 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PRELID2Q8N945 189 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TMEM143Q96AN5 459 aa15.35■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms