RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 SOX10P56693 466 aa20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 GPC5P78333 572 aa20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 PPFIA1Q13136 1202 aa20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 SEMA4DQ92854 862 aa20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 POLR3FQ9H1D9 316 aaPredicted RBP20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 CALCOCO1Q9P1Z2 691 aa20.34■□□□□ 0.85
PPP1R3F-202ENST00000376188 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 GPC2Q8N158 579 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 CCDC26Q8TAB7 109 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 BICD1Q96G01 975 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 CTTNBP2NLQ9P2B4 639 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 COG5Q9UP83 839 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 SIP14410 1827 aa20.33■□□□□ 0.85
PPP1R3F-202ENST00000376188 GOLGA6CA6NDK9 693 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 GOLGA6DP0CG33 693 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 PPP2R5EQ16537 467 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 LEKR1Q6ZMV7 388 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 MAATS1Q7Z4T9 603 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 NOP9Q86U38 636 aaKnown RBP20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 HELQQ8TDG4 1101 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 KCNN1Q92952 543 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 DDX47Q9H0S4 455 aaKnown RBP20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 KIAA1586Q9HCI6 787 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 RAB20Q9NX57 234 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 GOLGA6AQ9NYA3 693 aa20.33■□□□□ 0.84
PPP1R3F-202ENST00000376188 MIF4GDA9UHW6 222 aaKnown RBP20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 SGPL1O95470 568 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 ACTN2P35609 894 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM76AQ8TAV0 307 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM81BQ96LP2 452 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 PLEKHA4Q9H4M7 779 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 CYP26A1O43174 497 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 ZC3H11AO75152 810 aaKnown RBP eCLIP20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 CHRNB2P17787 502 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 POLGP54098 1239 aaPredicted RBP20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 ERVK-9P63128 1117 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 EMC2Q15006 297 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 MTERF2Q49AM1 385 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 ENOSF1Q7L5Y1 443 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 TAS1R2Q8TE23 839 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 TELO2Q9Y4R8 837 aa20.32■□□□□ 0.84
PPP1R3F-202ENST00000376188 BHMG1C9JSJ3 638 aaPredicted RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 KIAA0391O15091 583 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 MTA2O94776 668 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 FGGP02679 453 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM153BP0C7A2 387 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 PDE6CP51160 858 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 PRPF4BQ13523 1007 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM153CQ494X1 144 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 CFAP58Q5T655 872 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 ANKRD35Q8N283 1001 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 RNPC3Q96LT9 517 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 POP1Q99575 1024 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 ZNF302Q9NR11 478 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 FBXO40Q9UH90 709 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM153AQ9UHL3 310 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 MAFBQ9Y5Q3 323 aaPredicted RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 ZNF233A6NK53 670 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 ATG7O95352 703 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 DCAF12L1Q5VU92 463 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 TAS1R3Q7RTX0 852 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 SLC47A2Q86VL8 602 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 MORC4Q8TE76 937 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 PCDHB18PQ96TA0 734 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 ALG6Q9Y672 507 aa20.31■□□□□ 0.84
PPP1R3F-202ENST00000376188 GOLGA6L10A0A0M3HER8 536 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 DLATP10515 647 aaKnown RBP20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 ITGA4P13612 1032 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 CYP11B1P15538 503 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 LIG4P49917 911 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 GCNT1Q02742 428 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 HLTFQ14527 1009 aaKnown RBP eCLIP20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 ZSCAN26Q16670 478 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 CYFIP1Q7L576 1253 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 IQCKQ8N0W5 287 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 UBL4BQ8N7F7 174 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 ZIM3Q96PE6 472 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 RPS6KC1Q96S38 1066 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 TOPORSQ9NS56 1045 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 SYNGAP1Q96PV0 1343 aa20.3■□□□□ 0.84
PPP1R3F-202ENST00000376188 TULP1O00294 542 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 EXTL3O43909 919 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 OATP04181 439 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 GUCY2FP51841 1108 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 FMO1Q01740 532 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 CDR2Q01850 454 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 SP2Q02086 613 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 STRN3Q13033 797 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 LBX2Q6XYB7 198 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 FAM213AQ9BRX8 229 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 SNCAIPQ9Y6H5 919 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 OTOFQ9HC10 1997 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 RPS6KA5O75582 802 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 HSPA9P38646 679 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 AMACRQ9UHK6 382 aa20.29■□□□□ 0.84
PPP1R3F-202ENST00000376188 PAPPA2Q9BXP8 1791 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms