RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EML1O00423 815 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 ZBTB39O15060 712 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 LUC7L3O95232 432 aaKnown RBP13.88□□□□□ -0.19
MSH5-204ENST00000375755 FESP07332 822 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 RAB27AP51159 221 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 AP3B2Q13367 1082 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 PRPF4BQ13523 1007 aaKnown RBP13.88□□□□□ -0.19
MSH5-204ENST00000375755 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
MSH5-204ENST00000375755 CATSPER3Q86XQ3 398 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 FITM2Q8N6M3 262 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 MGARPQ8TDB4 240 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 DNAJC19Q96DA6 116 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 ZNF536O15090 1300 aa13.88□□□□□ -0.19
MSH5-204ENST00000375755 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 NFIBO00712 420 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 SUN1O94901 812 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 H2AFZP0C0S5 128 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 EPS15P42566 896 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 CTCFP49711 727 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 MTMR2Q13614 643 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 H2AFVQ71UI9 128 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 RAB34Q9BZG1 259 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 RGL1Q9NZL6 768 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 COL20A1Q9P218 1284 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 TTC7AQ9ULT0 858 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 HGSO14964 777 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 KIAA0391O15091 583 aaKnown RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 CHMP2AO43633 222 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 AHCYL1O43865 530 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 MYBL1P10243 752 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 UCHL3P15374 230 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 ZNF76P36508 570 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 ATP11AP98196 1134 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 AUHQ13825 339 aaKnown RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 IGLV3-22A0A075B6J6 115 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 MAP3K13O43283 966 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 SPATA31C1P0DKV0 1188 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 TNFAIP8L3Q5GJ75 292 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 SYCE1Q8N0S2 351 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 GBP7Q8N8V2 638 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 RAVER2Q9HCJ3 691 aaKnown RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 OSGEPQ9NPF4 335 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 PKD2L1Q9P0L9 805 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 AJAP1Q9UKB5 411 aaPredicted RBP13.87□□□□□ -0.19
MSH5-204ENST00000375755 AMFRQ9UKV5 643 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
MSH5-204ENST00000375755 FLOT1O75955 427 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 GNA14O95837 355 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 FGFR4P22455 802 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 ARSHQ5FYA8 562 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 ANO7Q6IWH7 933 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 SLC30A9Q6PML9 568 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 RMDN2Q96LZ7 410 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 BZW2Q9Y6E2 419 aaKnown RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 DDX3XO00571 662 aaKnown RBP eCLIP13.86□□□□□ -0.197e-9■■□□□ 12.6
MSH5-204ENST00000375755 GJB6O95452 261 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 PLA2G4BP0C869 781 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 CREB1P16220 341 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 TUBP50607 506 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 PABPC4Q13310 644 aaKnown RBP eCLIP13.86□□□□□ -0.19
MSH5-204ENST00000375755 ZNF211Q13398 564 aaPredicted RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 Q4G0T1 1027 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 U2AF1L4Q8WU68 220 aaKnown RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 UTP4Q969X6 686 aaKnown RBP13.86□□□□□ -0.19
MSH5-204ENST00000375755 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 EMILIN3Q9NT22 766 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 IRAK4Q9NWZ3 460 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 VAV3Q9UKW4 847 aa13.86□□□□□ -0.19
MSH5-204ENST00000375755 CENPFP49454 3210 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 A0A0A6YYK5 440 aaPredicted RBP13.85□□□□□ -0.19
MSH5-204ENST00000375755 FAM170AA1A519 330 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 RASGRF2O14827 1237 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 SPP2Q13103 211 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 SLC17A8Q8NDX2 589 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 TMEM109Q9BVC6 243 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 MLXIPLQ9NP71 852 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 CPSF2Q9P2I0 782 aaKnown RBP13.85□□□□□ -0.19
MSH5-204ENST00000375755 ZMYND8Q9ULU4 1186 aaPredicted RBP13.85□□□□□ -0.19
MSH5-204ENST00000375755 ARL2BPQ9Y2Y0 163 aa13.85□□□□□ -0.19
MSH5-204ENST00000375755 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms