RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ADCY2Q08462 1091 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 IKQ13123 557 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 LONRF1Q17RB8 773 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 C1orf186Q6ZWK4 172 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 CSRNP1Q96S65 589 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 ACP6Q9NPH0 428 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 AGPAT3Q9NRZ7 376 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 FRMD4BQ9Y2L6 1034 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 SLITRK3O94933 977 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 UBOX5O94941 541 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 GAP43P17677 238 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 SREBF1P36956 1147 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 TLDC1Q6P9B6 456 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 EXOC3L1Q86VI1 746 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 TAX1BP1Q86VP1 789 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 FIZ1Q96SL8 496 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 MTRF1LQ9UGC7 380 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 CNOT7Q9UIV1 285 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 PSME4Q14997 1843 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 GDF11O95390 407 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 CTNNA2P26232 953 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 PEX5P50542 639 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 ARHGEF19Q8IW93 802 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 UBL4BQ8N7F7 174 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 MIEF2Q96C03 454 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 HSD17B14Q9BPX1 270 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 POLR3CQ9BUI4 534 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 PARVGQ9HBI0 331 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 PCYOX1Q9UHG3 505 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 TISP43B9A030 160 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 CLNS1AP54105 237 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 KIF22Q14807 665 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 HS2ST1Q7LGA3 356 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 RHOT2Q8IXI1 618 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 LMO3Q8TAP4 145 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 KAT5Q92993 513 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
CLCNKA-202ENST00000375692 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 SNX3O60493 162 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 EXOC3O60645 756 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ACSL3O95573 720 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 GSTA1P08263 222 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 GBP2P32456 591 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 FAM178BQ8IXR5 827 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 DYDC1Q8WWB3 177 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 THOC1Q96FV9 657 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 PCDHB18PQ96TA0 734 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 PCIF1Q9H4Z3 704 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ATP6V0A4Q9HBG4 840 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 DMAC2Q9NW81 257 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 PODXLO00592 558 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ENTPD3O75355 529 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 RARAP10276 462 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 RARGP13631 454 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 COILP38432 576 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 UBXN2AP68543 259 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 MYO1EQ12965 1108 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ODR4Q5SWX8 454 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 MAEAQ7L5Y9 396 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 CCDC134Q9H6E4 229 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 DNAJC17Q9NVM6 304 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 TMOD2Q9NZR1 351 aa15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 WRAP73Q9P2S5 460 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-202ENST00000375692 ALAS1P13196 640 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 GPC5P78333 572 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 BFSP1Q12934 665 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 CERKLQ49MI3 558 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 TNFAIP8L3Q5GJ75 292 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 KIF2BQ8N4N8 673 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 ART4Q93070 314 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 CTNNAL1Q9UBT7 734 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 PFASO15067 1338 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 MIF4GDA9UHW6 222 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 F5H6K3 240 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 SGPL1O95470 568 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms