RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 KIFAP3Q92845 792 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 ZBP1Q9H171 429 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 C2orf40Q9H1Z8 148 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 TLE6Q9H808 572 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 MARCH5Q9NX47 278 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 KLK14Q9P0G3 267 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 MUTYHQ9UIF7 546 aa17.21■□□□□ 0.35
SDHB-201ENST00000375499 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 ACKR2O00590 384 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 PDCP20941 246 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 NPTX2P47972 431 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 NDUFV1P49821 464 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 PEX3P56589 373 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 DSC1Q08554 894 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 KCNC3Q14003 757 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 PPP2R5AQ15172 486 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 MAPK6Q16659 721 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 TRIM67Q6ZTA4 783 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 TMC7Q7Z402 723 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 SUGP1Q8IWZ8 645 aaKnown RBP17.2■□□□□ 0.34
SDHB-201ENST00000375499 COLGALT2Q8IYK4 626 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 VPS52Q8N1B4 723 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 SNX21Q969T3 373 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 PBXIP1Q96AQ6 731 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 TMEM169Q96HH4 297 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 TRIM6Q9C030 488 aaPredicted RBP17.2■□□□□ 0.34
SDHB-201ENST00000375499 CACNG4Q9UBN1 327 aa17.2■□□□□ 0.34
SDHB-201ENST00000375499 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 C2orf71A6NGG8 1288 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 SSBP05455 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
SDHB-201ENST00000375499 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 NUBP1P53384 320 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 KRT17Q04695 432 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 COASYQ13057 564 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 KARSQ15046 597 aaKnown RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 SYT2Q8N9I0 419 aaPredicted RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 NGRNQ9NPE2 291 aaKnown RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 SNTG2Q9NY99 539 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 ARHGAP28Q9P2N2 729 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 PUF60Q9UHX1 559 aaKnown RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
SDHB-201ENST00000375499 PRG3Q9Y2Y8 225 aaPredicted RBP17.19■□□□□ 0.34
SDHB-201ENST00000375499 TMEM221A6NGB7 291 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 CCDC169A6NNP5 214 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 M0R296 226 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 NRP1O14786 923 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 N4BP3O15049 544 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 RECQL4O94761 1208 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 BMP15O95972 392 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 PLCG1P19174 1290 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 FOXK2Q01167 660 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 CBX2Q14781 532 aaPredicted RBP17.18■□□□□ 0.34
SDHB-201ENST00000375499 ARSHQ5FYA8 562 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 PDE12Q6L8Q7 609 aaKnown RBP17.18■□□□□ 0.34
SDHB-201ENST00000375499 DDX53Q86TM3 631 aaKnown RBP17.18■□□□□ 0.34
SDHB-201ENST00000375499 SMRP1Q8NCR6 262 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 AK8Q96MA6 479 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
SDHB-201ENST00000375499 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
SDHB-201ENST00000375499 LOC730098B7Z3J9 87 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 PTGESO14684 152 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 STX6O43752 255 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 ZXDAP98168 799 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 DMP1Q13316 513 aaPredicted RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 SMC1AQ14683 1233 aaKnown RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 TMEM132AQ24JP5 1023 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 ATF7IP2Q5U623 682 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 LLGL2Q6P1M3 1020 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 FBXL6Q8N531 539 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 CEP120Q8N960 986 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 MRPL43Q8N983 215 aaKnown RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 RABGGTAQ92696 567 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 FAM193BQ96PV7 902 aaPredicted RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 CDCA3Q99618 268 aaPredicted RBP17.17■□□□□ 0.34
SDHB-201ENST00000375499 TMEM175Q9BSA9 504 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 CDH22Q9UJ99 828 aa17.17■□□□□ 0.34
SDHB-201ENST00000375499 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.16■□□□□ 0.34
SDHB-201ENST00000375499 SLC16A4O15374 487 aa17.16■□□□□ 0.34
SDHB-201ENST00000375499 EFEMP2O95967 443 aa17.16■□□□□ 0.34
SDHB-201ENST00000375499 CTSAP10619 480 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms