RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 ZEB2O60315 1214 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SNUPNO95149 360 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 IGHDP01880 384 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 APPP05067 770 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FAM153BP0C7A2 387 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZKSCAN1P17029 563 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ADD2P35612 726 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 NBL1P41271 181 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TNNT2P45379 298 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SNX16P57768 344 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZKSCAN8Q15776 578 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PTPN21Q16825 1174 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ST3GAL2Q16842 350 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 C21orf62-AS1Q17RA5 79 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ISM2Q6H9L7 571 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HIBCHQ6NVY1 386 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 LDHAL6AQ6ZMR3 332 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FASTKD5Q7L8L6 764 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SRGAP1Q7Z6B7 1085 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SNX32Q86XE0 403 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 LURAP1LQ8IV03 231 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SP8Q8IXZ3 490 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 UBR7Q8N806 425 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HDAC2Q92769 488 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TIFAQ96CG3 184 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HIC2Q96JB3 615 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 AGO4Q9HCK5 861 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CD248Q9HCU0 757 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GCM1Q9NP62 436 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SMYD2Q9NRG4 433 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SRRDQ9UH36 339 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TMEM59LQ9UK28 342 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TPCN1Q9ULQ1 816 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 APOBEC2Q9Y235 224 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 IKBKGQ9Y6K9 419 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 KMT2EQ8IZD2 1858 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DDX60LQ5H9U9 1706 aaKnown RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SMTNL1A8MU46 457 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 PMM2O15305 246 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 NUAK1O60285 661 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 PGRP06401 933 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SYN1P17600 705 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CAPN3P20807 821 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 LPOP22079 712 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 GRK2P25098 689 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ADCY1Q08828 1119 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 PPFIA1Q13136 1202 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 TMED1Q13445 227 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 TCIRG1Q13488 830 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 STAT4Q14765 748 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 NCAPHQ15003 741 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CCDC85BQ15834 202 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 RETSATQ6NUM9 610 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 FBXL19Q6PCT2 694 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ABRAXAS1Q6UWZ7 409 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 DTHD1Q6ZMT9 781 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SPATC1Q76KD6 591 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SRLQ86TD4 932 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 LRRTM3Q86VH5 581 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SKAP1Q86WV1 359 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 FAM178BQ8IXR5 827 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 REXO1Q8N1G1 1221 aaKnown RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 FAM169BQ8N8A8 192 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 LSMEM1Q8N8F7 131 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 PHC3Q8NDX5 983 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CCT6BQ92526 530 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ATP6V1E2Q96A05 226 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 FERD3LQ96RJ6 166 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 BCO2Q9BYV7 579 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF552Q9H707 407 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 DBNDD1Q9H9R9 158 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CYP4F11Q9HBI6 524 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SSU72Q9NP77 194 aaKnown RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 NSMCE4AQ9NXX6 385 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 OGDHLQ9ULD0 1010 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF281Q9Y2X9 895 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SNX5Q9Y5X3 404 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SLC12A7Q9Y666 1083 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 COL4A3Q01955 1670 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 A0A0G2JMZ2 1700 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 KTN1Q86UP2 1357 aaKnown RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 C19orf81C9J6K1 198 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 TOR1BO14657 336 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 GABRDO14764 452 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 GADD45BO75293 160 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 AGR2O95994 175 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CST3P01034 146 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CYP19A1P11511 503 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 SDHBP21912 280 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 GRK4P32298 578 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 RECQLP46063 649 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 PAPOLAP51003 745 aaKnown RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ALDH5A1P51649 535 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CAP1Q01518 475 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 ARHGAP29Q52LW3 1261 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 RILPL1Q5EBL4 403 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 VPS53Q5VIR6 699 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 TLDC1Q6P9B6 456 aa2.61□□□□□ -1.99
CCDC7-204ENST00000375025 CCDC129Q6ZRS4 1044 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms