RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 DGKDQ16760 1214 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 KIAA0753Q2KHM9 967 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 ZC2HC1CQ53FD0 456 aaPredicted RBP16.87■□□□□ 0.29
CCDC40-202ENST00000374876 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 SLC35C1Q96A29 364 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 GLT1D1Q96MS3 346 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 LXNQ9BS40 222 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 STARD7Q9NQZ5 370 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 SLC9A2Q9UBY0 812 aa16.87■□□□□ 0.29
CCDC40-202ENST00000374876 GSTTP1A0A1W2PQM5 241 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 PPFIA4O75335 1185 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
CCDC40-202ENST00000374876 PAFAH1B1P43034 410 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 RGS19P49795 217 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 PTK2Q05397 1052 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 DPY19L2P1Q6NXN4 242 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 FAM186BQ8IYM0 893 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 MMGT1Q8N4V1 131 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 RIT2Q99578 217 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 TLR10Q9BXR5 811 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 GCNT4Q9P109 453 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 WRAP73Q9P2S5 460 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ODF2LQ9ULJ1 636 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 NFASCO94856 1347 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 UBE4BO95155 1302 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ZMYM2Q9UBW7 1377 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ARHGEF35A5YM69 484 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 CCNE2O96020 404 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 TNNT3P45378 269 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ZNF131P52739 623 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 NFIL3Q16649 462 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 LRRC26Q2I0M4 334 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ODR4Q5SWX8 454 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 HS2ST1Q7LGA3 356 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 ZNF720Q7Z2F6 126 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 IRF2BP2Q7Z5L9 587 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 TBC1D22BQ9NU19 505 aa16.86■□□□□ 0.29
CCDC40-202ENST00000374876 GTPBP10A4D1E9 387 aaKnown RBP16.85■□□□□ 0.29
CCDC40-202ENST00000374876 PALMO75781 387 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 ZMYND10O75800 440 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 KLRC1P26715 233 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 TCF7P36402 384 aaPredicted RBP16.85■□□□□ 0.29
CCDC40-202ENST00000374876 ACTR2P61160 394 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 HSP90B2PQ58FF3 399 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 BANK1Q8NDB2 785 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 KAT2BQ92831 832 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
CCDC40-202ENST00000374876 FBXL5Q9UKA1 691 aa16.85■□□□□ 0.29
CCDC40-202ENST00000374876 GRIN2DO15399 1336 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 LRRIQ3A6PVS8 624 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-202ENST00000374876 MATR3P43243 847 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCDC40-202ENST00000374876 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-202ENST00000374876 TRIM50Q86XT4 487 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 C16orf70Q9BSU1 422 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 LGALS2P05162 132 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 HOXD8P13378 290 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-202ENST00000374876 GUCY2CP25092 1073 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 ITGA7Q13683 1181 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 CFAP221Q4G0U5 840 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 MIER3Q7Z3K6 550 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 BORCS6Q96GS4 357 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 FIZ1Q96SL8 496 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
CCDC40-202ENST00000374876 A0A0U1RQG5 324 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-202ENST00000374876 KPNA6O60684 536 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 CABYRO75952 493 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 CCNI2Q6ZMN8 369 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-202ENST00000374876 VPS36Q86VN1 386 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 GOLGA5Q8TBA6 731 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 RUBCNQ92622 972 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 DPF3Q92784 378 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 SIX2Q9NPC8 291 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-202ENST00000374876 RNF14Q9UBS8 474 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 PCDHGC5Q9Y5F6 944 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 MYH10P35580 1976 aa16.83■□□□□ 0.28
CCDC40-202ENST00000374876 FTCDO95954 541 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 ANXA13P27216 316 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 PRKCIP41743 596 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 CYP2J2P51589 502 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 SYCP3Q8IZU3 236 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 ZBTB9Q96C00 473 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 PCYT2Q99447 389 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 LRRC1Q9BTT6 524 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 AGPAT3Q9NRZ7 376 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 SMARCAL1Q9NZC9 954 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 VPS18Q9P253 973 aa16.82■□□□□ 0.28
CCDC40-202ENST00000374876 PCDH10Q9P2E7 1040 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms