RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MEI1Q5TIA1 1274 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 NCCRP1Q6ZVX7 275 aaPredicted RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 MIGA2Q7L4E1 593 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 ASAP3Q8TDY4 903 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 C1orf54Q8WWF1 131 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 CNOT7Q9UIV1 285 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 PRPF3O43395 683 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 APOA1P02647 267 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 FCER1AP12319 257 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 TFAP4Q01664 338 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 GEN1Q17RS7 908 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 FIGNQ5HY92 759 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 RNF43Q68DV7 783 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 ISLR2Q6UXK2 745 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 MCF2L2Q86YR7 1114 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PROM2Q8N271 834 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 MARCH10Q8NA82 808 aaPredicted RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 ZNF507Q8TCN5 953 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 SDCCAG3Q96C92 435 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PRPF18Q99633 342 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 SPATA16Q9BXB7 569 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 ING2Q9H160 280 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 RABGEF1Q9UJ41 708 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 FANCGO15287 622 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 RNMTO43148 476 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 ITIH2P19823 946 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 NFKBIAP25963 317 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PPARGP37231 505 aaPredicted RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 EVA1CP58658 441 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 SLC12A4Q9UP95 1085 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 CCDC195A0A1B0GUA6 201 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 C5orf60A6NFR6 353 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 COQ9O75208 318 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 KRT37O76014 449 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ITGA4P13612 1032 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 CIITAP33076 1130 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 NAA20P61599 178 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ATP2C1P98194 919 aaPredicted RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 MTFR1Q15390 333 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 DDB1Q16531 1140 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 IZUMO3Q5VZ72 239 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 SLC25A41Q8N5S1 370 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 RFWD2Q8NHY2 731 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 TIMMDC1Q9NPL8 285 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 TTC7AQ9ULT0 858 aaPredicted RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 RFX7Q2KHR2 1363 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 CEP152O94986 1710 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 A0A087X0T9 212 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 DDHD2O94830 711 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 FAM58BPP0C7Q3 252 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 FAM228BP0C875 321 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 TPBGLP0DKB5 382 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 CDH3P22223 829 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 KCNJ1P48048 391 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 HSPA13P48723 471 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 CDK7P50613 346 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 CHN2P52757 468 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 UBE3CQ15386 1083 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 NT5DC1Q5TFE4 455 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 PPM1KQ8N3J5 372 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 MARCOQ9UEW3 520 aaPredicted RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ARHGAP26Q9UNA1 814 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 REXO2Q9Y3B8 237 aaKnown RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 WDR17Q8IZU2 1322 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ZCCHC11Q5TAX3 1644 aaKnown RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 KDM3AQ9Y4C1 1321 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 KPNA4O00629 521 aaPredicted RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 DLATP10515 647 aaKnown RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 PSMC3P17980 439 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
CD28-202ENST00000374481 ACAP1Q15027 740 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 MEA1Q16626 185 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 KLHL38Q2WGJ6 581 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 RINT1Q6NUQ1 792 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 GLYCTKQ8IVS8 523 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 GPR108Q9NPR9 543 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 EMILIN3Q9NT22 766 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ETNK2Q9NVF9 386 aa10.85□□□□□ -0.67
CD28-202ENST00000374481 ZNF839A8K0R7 811 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms