RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 PAWRQ96IZ0 340 aaKnown RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 LBHD1Q9BQE6 289 aaPredicted RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 NR3C1P04150 777 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 RNF149Q8NC42 400 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 PPP1R36Q96LQ0 422 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 BARHL2Q9NY43 387 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 FBXL5Q9UKA1 691 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 MYL1P05976 194 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 SKOR1P84550 965 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 EPAS1Q99814 870 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 MORF4L2Q15014 288 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF467Q7Z7K2 595 aaPredicted RBP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 TJP3O95049 919 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 VCAM1P19320 739 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 RANBP1P43487 201 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 AARSP49588 968 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 FAM180AQ6UWF9 173 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 TMEM143Q96AN5 459 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 BTBD6Q96KE9 485 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF711Q9Y462 761 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 KLRK1P26718 216 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 KCNJ6P48051 423 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 KIAA2013Q8IYS2 634 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF229Q9UJW7 825 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 CFAP69A5D8W1 941 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 PRPF4O43172 522 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 PALMO75781 387 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 KRT37O76014 449 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 WDR48Q8TAF3 677 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
TRAF1-201ENST00000373887 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
TRAF1-201ENST00000373887 TRPM1Q7Z4N2 1603 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 E5RI56 91 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ALCAMQ13740 583 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 PJA2O43164 708 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 SUPT3HO75486 399 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 PSMC5P62195 406 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 KRT31Q15323 416 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 C12orf60Q5U649 245 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 RFWD2Q8NHY2 731 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 EGFL8Q99944 293 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 RCOR1Q9UKL0 485 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 TMCC1O94876 653 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 GGPS1O95749 300 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ZFXP17010 805 aaPredicted RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 KRT4P19013 534 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 PDXDC1Q6P996 788 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF34Q8IZ26 560 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 OR9Q1Q8NGQ5 310 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 CTIFO43310 598 aaKnown RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ARL4CP56559 192 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ACTN3Q08043 901 aaPredicted RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ZCWPW1Q9H0M4 648 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 HPS4Q9NQG7 708 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 LCP1P13796 627 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 RECQLP46063 649 aaPredicted RBP15.18■□□□□ 0.02
TRAF1-201ENST00000373887 ERFP50548 548 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 UNC13DQ70J99 1090 aa15.18■□□□□ 0.02
TRAF1-201ENST00000373887 KDM1AO60341 852 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 ATP1A3P13637 1013 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 SFNP31947 248 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 STAT5BP51692 787 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 LRRC8EQ6NSJ5 796 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 XXYLT1Q8NBI6 393 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 MRPL4Q9BYD3 311 aaKnown RBP15.17■□□□□ 0.02
TRAF1-201ENST00000373887 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
TRAF1-201ENST00000373887 SRBD1Q8N5C6 995 aaKnown RBP15.17■□□□□ 0.02
TRAF1-201ENST00000373887 ARL8AQ96BM9 186 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 ADAMTS1Q9UHI8 967 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 A8MXQ7 604 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 KPNA7A9QM74 516 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 YWHABP31946 246 aaKnown RBP15.17■□□□□ 0.02
TRAF1-201ENST00000373887 CUL1Q13616 776 aa15.17■□□□□ 0.02
TRAF1-201ENST00000373887 DDIASQ8IXT1 998 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms