RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-201ENST00000373554 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
HDAC8-201ENST00000373554 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 SPG21Q9NZD8 308 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 PARP2Q9UGN5 583 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 TNFSF13BQ9Y275 285 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 MYH11P35749 1972 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
HDAC8-201ENST00000373554 MYMKA6NI61 221 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 INPPL1O15357 1258 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 SCNN1GP51170 649 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 BCAR1P56945 870 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 SPPL3Q8TCT6 385 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 POF1BQ8WVV4 589 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 BICD1Q96G01 975 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 TMEM169Q96HH4 297 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 ZFP42Q96MM3 310 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 ACO2Q99798 780 aaKnown RBP13.19□□□□□ -0.3
HDAC8-201ENST00000373554 TCHPQ9BT92 498 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
HDAC8-201ENST00000373554 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 NRDE2Q9H7Z3 1164 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 MAGEF1Q9HAY2 307 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 SEL1LQ9UBV2 794 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 PUF60Q9UHX1 559 aaKnown RBP13.19□□□□□ -0.3
HDAC8-201ENST00000373554 LZTS1Q9Y250 596 aa13.19□□□□□ -0.3
HDAC8-201ENST00000373554 TOM1L1O75674 476 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 RECQL4O94761 1208 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 IDEP14735 1019 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 GAP43P17677 238 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
HDAC8-201ENST00000373554 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
HDAC8-201ENST00000373554 AMPD3Q01432 767 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 GRIK3Q13003 919 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 E2F4Q16254 413 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-201ENST00000373554 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
HDAC8-201ENST00000373554 KCNN1Q92952 543 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
HDAC8-201ENST00000373554 CDT1Q9H211 546 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 SNTG2Q9NY99 539 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 THEGQ9P2T0 379 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 GDAQ9Y2T3 454 aa13.18□□□□□ -0.3
HDAC8-201ENST00000373554 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 CLDN3O15551 220 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 NR1I2O75469 434 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 DDHD2O94830 711 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 GALTP07902 379 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 MCF2P10911 925 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 PROZP22891 400 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 DNAJB1P25685 340 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 LIG4P49917 911 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 YARSP54577 528 aaKnown RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
HDAC8-201ENST00000373554 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 TBX20Q9UMR3 447 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
HDAC8-201ENST00000373554 ALDH2P05091 517 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 CMA1P23946 247 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 NMT1P30419 496 aaKnown RBP13.16□□□□□ -0.3
HDAC8-201ENST00000373554 GRM5P41594 1212 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 SLC11A1P49279 550 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 GTF2BQ00403 316 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 CAMK1Q14012 370 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
HDAC8-201ENST00000373554 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
HDAC8-201ENST00000373554 MAP4K3Q8IVH8 894 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 CEP57L1Q8IYX8 460 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 CEP120Q8N960 986 aa13.16□□□□□ -0.3
HDAC8-201ENST00000373554 STAMQ92783 540 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms