RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ATG2AQ2TAZ0 1938 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 DGKIO75912 1065 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 STAG3L1P0CL83 205 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 PROZP22891 400 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 LIG4P49917 911 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 HTRA4P83105 476 aaPredicted RBP20.3■□□□□ 0.84
CDX4-201ENST00000373514 STK4Q13043 487 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 AGMOQ6ZNB7 445 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 EPM2AIP1Q7L775 607 aaPredicted RBP20.3■□□□□ 0.84
CDX4-201ENST00000373514 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 HELQQ8TDG4 1101 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 HVCN1Q96D96 273 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 NKX2-4Q9H2Z4 354 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 ELAC1Q9H777 363 aaKnown RBP20.3■□□□□ 0.84
CDX4-201ENST00000373514 PLXNA4Q9HCM2 1894 aa20.3■□□□□ 0.84
CDX4-201ENST00000373514 PIGRP01833 764 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 CA3P07451 260 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 DNAJB2P25686 324 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 SMAD3P84022 425 aaKnown RBP20.29■□□□□ 0.84
CDX4-201ENST00000373514 MPZL3Q6UWV2 235 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 NELFCDQ8IXH7 590 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 ZNF689Q96CS4 500 aaPredicted RBP20.29■□□□□ 0.84
CDX4-201ENST00000373514 YME1L1Q96TA2 773 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 ADPGKQ9BRR6 497 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 GDAQ9Y2T3 454 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
CDX4-201ENST00000373514 ZNF623O75123 536 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 AKAP5P24588 427 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 HOXD13P35453 343 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 SEZ6Q53EL9 994 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 ZPBP2Q6X784 338 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 MRPL10Q7Z7H8 261 aaKnown RBP20.28■□□□□ 0.84
CDX4-201ENST00000373514 TMEM192Q8IY95 271 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 SCFD1Q8WVM8 642 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 ACCSQ96QU6 501 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 PCDHA5Q9Y5H7 936 aa20.28■□□□□ 0.84
CDX4-201ENST00000373514 TBKBP1A7MCY6 615 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 TOM1L1O75674 476 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 RHOBTB3O94955 611 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 SCP2P22307 547 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 MATR3P43243 847 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDX4-201ENST00000373514 AFF1P51825 1210 aaKnown RBP20.27■□□□□ 0.84
CDX4-201ENST00000373514 OSTNP61366 133 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 ALCAMQ13740 583 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDX4-201ENST00000373514 DCAF4L1Q3SXM0 396 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 FAM43BQ6ZT52 329 aaPredicted RBP20.27■□□□□ 0.84
CDX4-201ENST00000373514 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.84
CDX4-201ENST00000373514 CCDC34Q96HJ3 373 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 RAD9AQ99638 391 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 TCHPQ9BT92 498 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 CXCL16Q9H2A7 254 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 INPP5FQ9Y2H2 1132 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 PCDHB13Q9Y5F0 798 aa20.27■□□□□ 0.84
CDX4-201ENST00000373514 EOMESO95936 686 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 SKIP12755 728 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 ITGA4P13612 1032 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 RAB30Q15771 203 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 THNSL1Q8IYQ7 743 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 SP7Q8TDD2 431 aaPredicted RBP20.27■□□□□ 0.83
CDX4-201ENST00000373514 SMARCE1Q969G3 411 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 CASD1Q96PB1 797 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 FUCA2Q9BTY2 467 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 TSPY26PQ9H489 355 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 RSAD1Q9HA92 442 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 INSL6Q9Y581 213 aa20.27■□□□□ 0.83
CDX4-201ENST00000373514 EIF3DO15371 548 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDX4-201ENST00000373514 MCF2P10911 925 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 ABCD1P33897 745 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 MLH1P40692 756 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 KCNB1Q14721 858 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 ZBTB41Q5SVQ8 909 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 ELOA2Q8IYF1 753 aaPredicted RBP20.26■□□□□ 0.83
CDX4-201ENST00000373514 SPATA20Q8TB22 786 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 ZNF507Q8TCN5 953 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 PGBD4Q96DM1 585 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 ZFP42Q96MM3 310 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 KLK14Q9P0G3 267 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 PARP2Q9UGN5 583 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 MSRAQ9UJ68 235 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 CHD9Q3L8U1 2897 aa20.26■□□□□ 0.83
CDX4-201ENST00000373514 UBE4BO95155 1302 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 GOLGA6L3A6NEY3 463 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 RECQL4O94761 1208 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 TNFSF9P41273 254 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 MCL1Q07820 350 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 BTG3Q14201 252 aaPredicted RBP20.25■□□□□ 0.83
CDX4-201ENST00000373514 ISM2Q6H9L7 571 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 STXBP4Q6ZWJ1 553 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 SYCP3Q8IZU3 236 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 ZSWIM2Q8NEG5 633 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 CCDC47Q96A33 483 aaKnown RBP20.25■□□□□ 0.83
CDX4-201ENST00000373514 TIFAQ96CG3 184 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 HOOK1Q9UJC3 728 aaKnown RBP20.25■□□□□ 0.83
CDX4-201ENST00000373514 EXOC7Q9UPT5 735 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 MAPK8IP1Q9UQF2 711 aa20.25■□□□□ 0.83
CDX4-201ENST00000373514 MRPL42Q9Y6G3 142 aaKnown RBP20.25■□□□□ 0.83
CDX4-201ENST00000373514 FSD2A1L4K1 749 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms