RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
TRAPPC3-204ENST00000373166 SRFP11831 508 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 ITGA4P13612 1032 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 NPEPPSP55786 919 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 LAMTOR4Q0VGL1 99 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 KIAA0319Q5VV43 1072 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 HDAC7Q8WUI4 952 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 SMG7Q92540 1137 aaKnown RBP21.32■■□□□ 1
TRAPPC3-204ENST00000373166 TMEM143Q96AN5 459 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 CEP170P1Q96L14 293 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 MINDY3Q9H8M7 445 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 RXFP1Q9HBX9 757 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 MARCH5Q9NX47 278 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 GTF3C3Q9Y5Q9 886 aa21.32■■□□□ 1
TRAPPC3-204ENST00000373166 RFPL2O75678 378 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 MYBP10242 640 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 ATP2B1P20020 1258 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 RFC5P40937 340 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 COLGALT2Q8IYK4 626 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 MYADMQ96S97 322 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 BACH2Q9BYV9 841 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 PLEKHA4Q9H4M7 779 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 DHX33Q9H6R0 707 aaKnown RBP21.31■■□□□ 1
TRAPPC3-204ENST00000373166 TBC1D17Q9HA65 648 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 PIDD1Q9HB75 910 aa21.31■■□□□ 1
TRAPPC3-204ENST00000373166 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.31■■□□□ 11e-17■■■■■ 62.9
TRAPPC3-204ENST00000373166 ASAP2O43150 1006 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 ERLIN2O94905 339 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 C1RP00736 705 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 NCBP1Q09161 790 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 EPHA7Q15375 998 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 PHLDB3Q6NSJ2 640 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 ZC3H14Q6PJT7 736 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 NOSTRINQ8IVI9 506 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 RNF168Q8IYW5 571 aaPredicted RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 ZNF579Q8NAF0 562 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 SMG8Q8ND04 991 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 TCP11Q8WWU5 503 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
TRAPPC3-204ENST00000373166 PCDHA12Q9UN75 941 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 SIT1Q9Y3P8 196 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 R4GN57 208 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 ZNF292O60281 2723 aa21.3■■□□□ 1
TRAPPC3-204ENST00000373166 ARL5CA6NH57 179 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 WNT7AO00755 349 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 GAS2O43903 313 aaKnown RBP21.29■■□□□ 1
TRAPPC3-204ENST00000373166 EFEMP2O95967 443 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 SPATA31D3P0C874 917 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 MCM7P33993 719 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 DSG1Q02413 1049 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 SPIRE1Q08AE8 756 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 ORC2Q13416 577 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-204ENST00000373166 PCBP1Q15365 356 aaKnown RBP eCLIP21.29■■□□□ 1
TRAPPC3-204ENST00000373166 SPATA31D4Q6ZUB0 917 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 PALB2Q86YC2 1186 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 RNF149Q8NC42 400 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 GPR152Q8TDT2 470 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 RIN2Q8WYP3 895 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-204ENST00000373166 ZNF707Q96C28 371 aaPredicted RBP21.29■■□□□ 1
TRAPPC3-204ENST00000373166 LXNQ9BS40 222 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 COLEC11Q9BWP8 271 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 NT5C3AQ9H0P0 336 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 IPPQ9Y573 584 aa21.29■■□□□ 1
TRAPPC3-204ENST00000373166 PAPLNO95428 1278 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 LAMP2P13473 410 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 AXLP30530 894 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 TXKP42681 527 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 DSC1Q08554 894 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 SPECC1Q5M775 1068 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 NOTUMQ6P988 496 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 OTUD6AQ7L8S5 288 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 RMDN1Q96DB5 314 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 CCDC51Q96ER9 411 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 GAD1Q99259 594 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 TTC12Q9H892 705 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-204ENST00000373166 ARHGEF3Q9NR81 526 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.28■■□□□ 13e-6■■□□□ 13.8
TRAPPC3-204ENST00000373166 CHST7Q9NS84 486 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 ZDHHC7Q9NXF8 308 aa21.28■■□□□ 1
TRAPPC3-204ENST00000373166 DCNP07585 359 aaKnown RBP21.27■■□□□ 1
TRAPPC3-204ENST00000373166 MLH1P40692 756 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 TRAPPC10P48553 1259 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 CYP4A11Q02928 519 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 TTC38Q5R3I4 469 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 FERMT3Q86UX7 667 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 KIAA2013Q8IYS2 634 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 DYDC2Q96IM9 177 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 MTMR9Q96QG7 549 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 EIF2AQ9BY44 585 aaKnown RBP21.27■■□□□ 1
TRAPPC3-204ENST00000373166 RNF39Q9H2S5 420 aa21.27■■□□□ 1
TRAPPC3-204ENST00000373166 BMP2KQ9NSY1 1161 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-204ENST00000373166 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.27■■□□□ 1
TRAPPC3-204ENST00000373166 CACNA1AO00555 2505 aa21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 ANHXE9PGG2 379 aa21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 TGM5O43548 720 aa21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 GJB2P29033 226 aa21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 SCNN1GP51170 649 aa21.26■□□□□ 0.99
TRAPPC3-204ENST00000373166 EMC2Q15006 297 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms