RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 CDHR5Q9HBB8 845 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
C9orf78-201ENST00000372447 FAM207AQ9NSI2 230 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-201ENST00000372447 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 CAND2O75155 1236 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 RPLP2P05387 115 aaKnown RBP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 GPC3P51654 580 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 CDK17Q00537 523 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 MXD4Q14582 209 aaPredicted RBP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 IRX2Q9BZI1 471 aaPredicted RBP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 ADAMTS10Q9H324 1103 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 TYW1Q9NV66 732 aaKnown RBP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 SEL1LQ9UBV2 794 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 GINS2Q9Y248 185 aa17.47■□□□□ 0.39
C9orf78-201ENST00000372447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.47■□□□□ 0.39
C9orf78-201ENST00000372447 EPHB6O15197 1021 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 EIF3DO15371 548 aaKnown RBP eCLIP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 TIMP1P01033 207 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 SELPP16109 830 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 HNRNPH3P31942 346 aaKnown RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 CYLC1P35663 651 aaPredicted RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 ZNF131P52739 623 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 CCL23P55773 120 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 MGAT3Q09327 533 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 FAM26DQ5JW98 314 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 CCDC170Q8IYT3 715 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 NEK11Q8NG66 645 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 WNT8AQ9H1J5 351 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 PRKAG2Q9UGJ0 569 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 REXO2Q9Y3B8 237 aaKnown RBP17.46■□□□□ 0.39
C9orf78-201ENST00000372447 CDY2AQ9Y6F7 541 aa17.46■□□□□ 0.39
C9orf78-201ENST00000372447 ASAP2O43150 1006 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 IQCF3P0C7M6 154 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 SRGAP2CP0DJJ0 459 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 RAG1P15918 1043 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 SYN1P17600 705 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 ARHGAP25P42331 645 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 KCNMA1Q12791 1236 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 CAPSQ13938 189 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 FRMD5Q7Z6J6 570 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 SCLYQ96I15 445 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 NLRP4Q96MN2 994 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 OSBPL7Q9BZF2 842 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 EDEM3Q9BZQ6 932 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 NHEJ1Q9H9Q4 299 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-201ENST00000372447 PLAGL2Q9UPG8 496 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 A0A087WZ62 844 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 M0QZ92 97 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 RPL13P26373 211 aaKnown RBP17.45■□□□□ 0.38
C9orf78-201ENST00000372447 KRT83P78385 493 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 CDC42EP1Q00587 391 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 MBTPS1Q14703 1052 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 GPNMBQ14956 572 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 RNF149Q8NC42 400 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 OSMRQ99650 979 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-201ENST00000372447 IFT122Q9HBG6 1241 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 ZMYND8Q9ULU4 1186 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-201ENST00000372447 TRPV2Q9Y5S1 764 aa17.45■□□□□ 0.38
C9orf78-201ENST00000372447 NR3C1P04150 777 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 NMT1P30419 496 aaKnown RBP17.44■□□□□ 0.38
C9orf78-201ENST00000372447 PEX3P56589 373 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 ZNF569Q5MCW4 686 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 TMEM40Q8WWA1 233 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 FIZ1Q96SL8 496 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 C17orf75Q9HAS0 396 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 MYO1AQ9UBC5 1043 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 UBE4BO95155 1302 aa17.44■□□□□ 0.38
C9orf78-201ENST00000372447 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 SLC16A3O15427 465 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 CSDE1O75534 798 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 PLS3P13797 630 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 CRYBB1P53674 252 aaPredicted RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 KCNA1Q09470 495 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 STXBP4Q6ZWJ1 553 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 ZNF720Q7Z2F6 126 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 BAP1Q92560 729 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 IFT74Q96LB3 600 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 ARMCX3Q9UH62 379 aaPredicted RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 TGFB1I1O43294 461 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 RRP9O43818 475 aaKnown RBP17.43■□□□□ 0.38
C9orf78-201ENST00000372447 ABL1P00519 1130 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 NAMPTP43490 491 aa17.43■□□□□ 0.38
C9orf78-201ENST00000372447 NPTX2P47972 431 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms