RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 KIF2BQ8N4N8 673 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 ERP44Q9BS26 406 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 APEX2Q9UBZ4 518 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 TRAF3IP3Q9Y228 551 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 TMEM120BA0PK00 339 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 MORF4L2Q15014 288 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 ROPN1BQ9BZX4 212 aaPredicted RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 ROPN1Q9HAT0 212 aaPredicted RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 UVRAGQ9P2Y5 699 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 WARS2Q9UGM6 360 aaKnown RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 NPHP3-ACAD11A0A0J9YXS1 232 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 QARSP47897 775 aaKnown RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 MYCBPAPQ8TBZ2 947 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 NMT1P30419 496 aaKnown RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 HSD17B3P37058 310 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 OCA2Q04671 838 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 TMTC4Q5T4D3 741 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 CYB5D1Q6P9G0 228 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 C16orf87Q6PH81 154 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 SUN2Q9UH99 717 aa18.18■□□□□ 0.5
PTP4A1-201ENST00000370651 RNF103-CHMP3A0A140T963 221 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 EDRF1Q3B7T1 1238 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 RARS2Q5T160 578 aaKnown RBP18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 RSPH3Q86UC2 560 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 RHPN2Q8IUC4 686 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 LXNQ9BS40 222 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 INPP5FQ9Y2H2 1132 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 C12orf60Q5U649 245 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 NPHS2Q9NP85 383 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 EHD2Q9NZN4 543 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ARAP3Q8WWN8 1544 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 PSMC1P62191 440 aaKnown RBP18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ROR1Q01973 937 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 KDSRQ06136 332 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ARMCX2Q7L311 632 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ANKMY2Q8IV38 441 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 NLRP4Q96MN2 994 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 NOD2Q9HC29 1040 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 CD248Q9HCU0 757 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ADA2Q9NZK5 511 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 GOLGA8RI6L899 631 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 NVLO15381 856 aaKnown RBP18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 TEX9Q8N6V9 391 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 ING2Q9H160 280 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 RANBP17Q9H2T7 1088 aaKnown RBP18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 HPSEQ9Y251 543 aa18.17■□□□□ 0.5
PTP4A1-201ENST00000370651 BCAR1P56945 870 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 DNAJC9Q8WXX5 260 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 FAM84BQ96KN1 310 aaPredicted RBP18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 DNAJC7Q99615 494 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■□ 23.3
PTP4A1-201ENST00000370651 SLC9A1P19634 815 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 CACNB3P54284 484 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 KRT76Q01546 638 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 ARL13BQ3SXY8 428 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 CCNYL1Q8N7R7 359 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 SERPINB4P48594 390 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 FMO5P49326 533 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 ERFP50548 548 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 C4orf33Q8N1A6 199 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 SYN2Q92777 582 aaPredicted RBP18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 TSSK1BQ9BXA7 367 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 PARVAQ9NVD7 372 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 ENO1P06733 434 aaKnown RBP18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 C3orf20Q8ND61 904 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 EXT2Q93063 718 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 PLA2G12BQ9BX93 195 aa18.16■□□□□ 0.5
PTP4A1-201ENST00000370651 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 HAUS6Q7Z4H7 955 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 ARL8AQ96BM9 186 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 EIF2AQ9BY44 585 aaKnown RBP18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 ABCB11O95342 1321 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 APBA3O96018 575 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 MED21Q13503 144 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 P3H1Q32P28 736 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 PAPD7Q5XG87 772 aaKnown RBP18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 PRPF31Q8WWY3 499 aaKnown RBP18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 RMDN3Q96TC7 470 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 UBN1Q9NPG3 1134 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 hCG_2014768A0A024R1R8 64 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 ASAP2O43150 1006 aa18.15■□□□□ 0.5
PTP4A1-201ENST00000370651 SLC4A1P02730 911 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms