RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SKIP12755 728 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
LMO4-201ENST00000370542 NPEPPSP55786 919 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 ZXDAP98168 799 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 LRMPQ12912 555 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 PLA2G4FQ68DD2 849 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 RHPN2Q8IUC4 686 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 ABI1Q8IZP0 508 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 KMT2EQ8IZD2 1858 aa16.45■□□□□ 0.22
LMO4-201ENST00000370542 RIF1Q5UIP0 2472 aaKnown RBP16.45■□□□□ 0.22
LMO4-201ENST00000370542 VPS13AQ96RL7 3174 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 CARNS1A5YM72 827 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 HIDE1A8MVS5 230 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 GAS2O43903 313 aaKnown RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 LYPLA2O95372 231 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 H2AFXP16104 143 aaPredicted RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 AVPR2P30518 371 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 RFC5P40937 340 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 KRT17Q04695 432 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 GPS2Q13227 327 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 NR5A1Q13285 461 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 MRPL10Q7Z7H8 261 aaKnown RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 KSR1Q8IVT5 923 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 SLC7A3Q8WY07 619 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 SCLT1Q96NL6 688 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 HSD17B14Q9BPX1 270 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 LXNQ9BS40 222 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 AGPAT5Q9NUQ2 364 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 FAM105AQ9NUU6 356 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
LMO4-201ENST00000370542 COL4A3BPQ9Y5P4 624 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 IRAK3Q9Y616 596 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 TCHHQ07283 1943 aa16.44■□□□□ 0.22
LMO4-201ENST00000370542 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 H0Y858 1186 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 ASAP2O43150 1006 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 SLITRK3O94933 977 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 HOXA11P31270 313 aaPredicted RBP16.43■□□□□ 0.22
LMO4-201ENST00000370542 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
LMO4-201ENST00000370542 KRT2P35908 639 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 PBX3P40426 434 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 RAB27AP51159 221 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 NUBP1P53384 320 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 RESTQ13127 1097 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 SNW1Q13573 536 aaKnown RBP16.43■□□□□ 0.22
LMO4-201ENST00000370542 CAMK4Q16566 473 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 SYCE2Q6PIF2 218 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 SRGAP1Q7Z6B7 1085 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 CEP170P1Q96L14 293 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
LMO4-201ENST00000370542 DNAJC25Q9H1X3 360 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 ZSWIM4Q9H7M6 989 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 RGL1Q9NZL6 768 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
LMO4-201ENST00000370542 DNAH14Q0VDD8 3507 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 TULP2O00295 520 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 DTNBO60941 627 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 HOXB8P17481 243 aaPredicted RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 NBL1P41271 181 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 BCAR1P56945 870 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 CCZ1BP86790 482 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 POU5F1BQ06416 359 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 PLPP4Q5VZY2 271 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 TWF2Q6IBS0 349 aaKnown RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 ANKRD54Q6NXT1 300 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 NECAB1Q8N987 351 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 PSPC1Q8WXF1 523 aaKnown RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 ZNF592Q92610 1267 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 MINDY3Q9H8M7 445 aa16.42■□□□□ 0.22
LMO4-201ENST00000370542 PIN4Q9Y237 131 aaKnown RBP16.42■□□□□ 0.22
LMO4-201ENST00000370542 MED19A0JLT2 244 aaPredicted RBP16.41■□□□□ 0.22
LMO4-201ENST00000370542 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
LMO4-201ENST00000370542 MEIS3P2A8K0S8 358 aa16.41■□□□□ 0.22
LMO4-201ENST00000370542 H3BQV1 296 aa16.41■□□□□ 0.22
LMO4-201ENST00000370542 GALTP07902 379 aa16.41■□□□□ 0.22
LMO4-201ENST00000370542 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
LMO4-201ENST00000370542 POLGP54098 1239 aaPredicted RBP16.41■□□□□ 0.22
LMO4-201ENST00000370542 LAMTOR4Q0VGL1 99 aa16.41■□□□□ 0.22
LMO4-201ENST00000370542 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms