RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 LRCH3Q96II8 777 aa15.07■□□□□ 0
SSR4-202ENST00000370085 TGS1Q96RS0 853 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 RPS6KC1Q96S38 1066 aa15.07■□□□□ 0
SSR4-202ENST00000370085 FIZ1Q96SL8 496 aa15.07■□□□□ 0
SSR4-202ENST00000370085 TOPORSQ9NS56 1045 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 PARP2Q9UGN5 583 aa15.07■□□□□ 0
SSR4-202ENST00000370085 YBX2Q9Y2T7 364 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 UBE4BO95155 1302 aa15.07■□□□□ 0
SSR4-202ENST00000370085 FNDC1Q4ZHG4 1894 aaPredicted RBP15.06■□□□□ 0
SSR4-202ENST00000370085 SOX1O00570 391 aaPredicted RBP15.06■□□□□ 0
SSR4-202ENST00000370085 MYOGP15173 224 aa15.06■□□□□ 0
SSR4-202ENST00000370085 PAN2Q504Q3 1202 aaKnown RBP15.06■□□□□ 0
SSR4-202ENST00000370085 NOMO2Q5JPE7 1267 aa15.06■□□□□ 0
SSR4-202ENST00000370085 HELQQ8TDG4 1101 aa15.06■□□□□ 0
SSR4-202ENST00000370085 FAM193BQ96PV7 902 aaPredicted RBP15.06■□□□□ 0
SSR4-202ENST00000370085 APOL6Q9BWW8 343 aa15.06■□□□□ 0
SSR4-202ENST00000370085 NXF3Q9H4D5 531 aaKnown RBP15.06■□□□□ 0
SSR4-202ENST00000370085 ZNF576Q9H609 170 aa15.06■□□□□ 0
SSR4-202ENST00000370085 MYO9BQ13459 2157 aa15.05■□□□□ 0
SSR4-202ENST00000370085 LINC01553A4QN01 128 aa15.05■□□□□ -0
SSR4-202ENST00000370085 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
SSR4-202ENST00000370085 PPP1R37O75864 691 aa15.05■□□□□ -0
SSR4-202ENST00000370085 MYBP10242 640 aa15.05■□□□□ -0
SSR4-202ENST00000370085 HARSP12081 509 aaKnown RBP15.05■□□□□ -0
SSR4-202ENST00000370085 ATF7P17544 494 aaPredicted RBP15.05■□□□□ -0
SSR4-202ENST00000370085 PROZP22891 400 aa15.05■□□□□ -0
SSR4-202ENST00000370085 CASP1P29466 404 aa15.05■□□□□ -0
SSR4-202ENST00000370085 FXR1P51114 621 aaKnown RBP eCLIP15.05■□□□□ -0
SSR4-202ENST00000370085 MCL1Q07820 350 aa15.05■□□□□ -0
SSR4-202ENST00000370085 DPYDQ12882 1025 aa15.05■□□□□ -0
SSR4-202ENST00000370085 KCNB1Q14721 858 aa15.05■□□□□ -0
SSR4-202ENST00000370085 KMT5BQ4FZB7 885 aa15.05■□□□□ -0
SSR4-202ENST00000370085 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
SSR4-202ENST00000370085 ZBTB33Q86T24 672 aa15.05■□□□□ -0
SSR4-202ENST00000370085 SMG8Q8ND04 991 aaKnown RBP15.05■□□□□ -0
SSR4-202ENST00000370085 LPPQ93052 612 aa15.05■□□□□ -0
SSR4-202ENST00000370085 SMARCE1Q969G3 411 aa15.05■□□□□ -0
SSR4-202ENST00000370085 ACAP3Q96P50 834 aa15.05■□□□□ -0
SSR4-202ENST00000370085 CASD1Q96PB1 797 aa15.05■□□□□ -0
SSR4-202ENST00000370085 GSDMAQ96QA5 445 aa15.05■□□□□ -0
SSR4-202ENST00000370085 MSTO1Q9BUK6 570 aa15.05■□□□□ -0
SSR4-202ENST00000370085 STRA6Q9BX79 667 aa15.05■□□□□ -0
SSR4-202ENST00000370085 CDT1Q9H211 546 aa15.05■□□□□ -0
SSR4-202ENST00000370085 RC3H2Q9HBD1 1191 aaKnown RBP15.05■□□□□ -0
SSR4-202ENST00000370085 PTPRHQ9HD43 1115 aa15.05■□□□□ -0
SSR4-202ENST00000370085 INPP5FQ9Y2H2 1132 aa15.05■□□□□ -0
SSR4-202ENST00000370085 USP20Q9Y2K6 914 aa15.05■□□□□ -0
SSR4-202ENST00000370085 PCDHB12Q9Y5F1 795 aa15.05■□□□□ -0
SSR4-202ENST00000370085 LCHNA4D1U4 455 aa15.04■□□□□ -0
SSR4-202ENST00000370085 KIAA0391O15091 583 aaKnown RBP15.04■□□□□ -0
SSR4-202ENST00000370085 RHOBTB3O94955 611 aa15.04■□□□□ -0
SSR4-202ENST00000370085 EDN1P05305 212 aa15.04■□□□□ -0
SSR4-202ENST00000370085 LAG3P18627 525 aa15.04■□□□□ -0
SSR4-202ENST00000370085 GRM5P41594 1212 aa15.04■□□□□ -0
SSR4-202ENST00000370085 SNRPFP62306 86 aaKnown RBP15.04■□□□□ -0
SSR4-202ENST00000370085 TAP1Q03518 808 aa15.04■□□□□ -0
SSR4-202ENST00000370085 EHHADHQ08426 723 aa15.04■□□□□ -0
SSR4-202ENST00000370085 CLLU1OSQ5K130 101 aa15.04■□□□□ -0
SSR4-202ENST00000370085 AGMOQ6ZNB7 445 aa15.04■□□□□ -0
SSR4-202ENST00000370085 HS2ST1Q7LGA3 356 aa15.04■□□□□ -0
SSR4-202ENST00000370085 THNSL1Q8IYQ7 743 aa15.04■□□□□ -0
SSR4-202ENST00000370085 GOLGA5Q8TBA6 731 aa15.04■□□□□ -0
SSR4-202ENST00000370085 POMGNT1Q8WZA1 660 aa15.04■□□□□ -0
SSR4-202ENST00000370085 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
SSR4-202ENST00000370085 PLVAPQ9BX97 442 aa15.04■□□□□ -0
SSR4-202ENST00000370085 GBP3Q9H0R5 595 aa15.04■□□□□ -0
SSR4-202ENST00000370085 SLC39A2Q9NP94 309 aa15.04■□□□□ -0
SSR4-202ENST00000370085 SNTG2Q9NY99 539 aa15.04■□□□□ -0
SSR4-202ENST00000370085 CGNQ9P2M7 1197 aaKnown RBP15.04■□□□□ -0
SSR4-202ENST00000370085 GDAQ9Y2T3 454 aa15.04■□□□□ -0
SSR4-202ENST00000370085 HES2Q9Y543 173 aa15.04■□□□□ -0
SSR4-202ENST00000370085 RALGAPA2Q2PPJ7 1873 aa15.03■□□□□ -0
SSR4-202ENST00000370085 ARL5CA6NH57 179 aa15.03■□□□□ -0
SSR4-202ENST00000370085 OGTO15294 1046 aa15.03■□□□□ -0
SSR4-202ENST00000370085 KLRC4O43908 158 aa15.03■□□□□ -0
SSR4-202ENST00000370085 OFD1O75665 1012 aa15.03■□□□□ -0
SSR4-202ENST00000370085 RECQL4O94761 1208 aa15.03■□□□□ -0
SSR4-202ENST00000370085 PRPF6O94906 941 aaKnown RBP15.03■□□□□ -0
SSR4-202ENST00000370085 LDHAP00338 332 aaKnown RBP15.03■□□□□ -0
SSR4-202ENST00000370085 RB1P06400 928 aa15.03■□□□□ -0
SSR4-202ENST00000370085 CLTAP09496 248 aa15.03■□□□□ -0
SSR4-202ENST00000370085 AKAP5P24588 427 aa15.03■□□□□ -0
SSR4-202ENST00000370085 CTNNB1P35222 781 aa15.03■□□□□ -0
SSR4-202ENST00000370085 PPM1AP35813 382 aa15.03■□□□□ -0
SSR4-202ENST00000370085 MLH1P40692 756 aa15.03■□□□□ -0
SSR4-202ENST00000370085 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
SSR4-202ENST00000370085 CASP5P51878 434 aa15.03■□□□□ -0
SSR4-202ENST00000370085 ERVK-21P61565 698 aa15.03■□□□□ -0
SSR4-202ENST00000370085 PNOCQ13519 176 aa15.03■□□□□ -0
SSR4-202ENST00000370085 DEFB123Q8N688 67 aa15.03■□□□□ -0
SSR4-202ENST00000370085 FBXO22Q8NEZ5 403 aa15.03■□□□□ -0
SSR4-202ENST00000370085 ZNF507Q8TCN5 953 aa15.03■□□□□ -0
SSR4-202ENST00000370085 C11orf84Q9BUA3 381 aaPredicted RBP15.03■□□□□ -0
SSR4-202ENST00000370085 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.03■□□□□ -0
SSR4-202ENST00000370085 CITO14578 2027 aa15.03■□□□□ -0
SSR4-202ENST00000370085 NLRC5Q86WI3 1866 aa15.03■□□□□ -0
SSR4-202ENST00000370085 TDRD15B5MCY1 1934 aaKnown RBP15.02■□□□□ -0
SSR4-202ENST00000370085 A0A0B4J269 797 aa15.02■□□□□ -0
SSR4-202ENST00000370085 INPPL1O15357 1258 aa15.02■□□□□ -0
SSR4-202ENST00000370085 PRR29P0C7W0 189 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms