RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RBAK-RBAKDNI3L0D1 243 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 HOXD13P35453 343 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 MATR3P43243 847 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 MORC3Q14149 939 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 CCDC183Q5T5S1 534 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 SLC39A4Q6P5W5 647 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 HS2ST1Q7LGA3 356 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 ZMYM2Q9UBW7 1377 aa16.99■□□□□ 0.31
PRPF38B-202ENST00000370022 A0A0B4J269 797 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 DGKIO75912 1065 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ITGA4P13612 1032 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ATF7P17544 494 aaPredicted RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 GARTP22102 1010 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ZBED2Q9BTP6 218 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 INSL6Q9Y581 213 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 TTC3P53804 2025 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 UPP2O95045 317 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 GRM5P41594 1212 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 HTRA4P83105 476 aaPredicted RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 STIM1Q13586 685 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 RBM43Q6ZSC3 357 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 ABI1Q8IZP0 508 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 RNF169Q8NCN4 708 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 RAD9AQ99638 391 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 MSTO1Q9BUK6 570 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 TYW1Q9NV66 732 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 GIT1Q9Y2X7 761 aa16.98■□□□□ 0.31
PRPF38B-202ENST00000370022 PDXKO00764 312 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 OGTO15294 1046 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 TLL1O43897 1013 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 LDHAP00338 332 aaKnown RBP16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 ADSSP30520 456 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 ARMCX5Q6P1M9 558 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 GLB1LQ6UWU2 654 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 TMEM174Q8WUU8 243 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 ZNF689Q96CS4 500 aaPredicted RBP16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 YME1L1Q96TA2 773 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 TOPORSQ9NS56 1045 aaPredicted RBP16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 HES2Q9Y543 173 aa16.97■□□□□ 0.31
PRPF38B-202ENST00000370022 BIN1O00499 593 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 PRCPP42785 496 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 SMAD3P84022 425 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 RAB30Q15771 203 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 FAM117BQ6P1L5 589 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 TMCO2Q7Z6W1 182 aaPredicted RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 C12orf56Q8IXR9 622 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 SMYD4Q8IYR2 804 aaPredicted RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 ADSSL1Q8N142 457 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 ACAP3Q96P50 834 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 HAPLN2Q9GZV7 340 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 TMEM117Q9H0C3 514 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 RC3H2Q9HBD1 1191 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 SNTG2Q9NY99 539 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 AGO2Q9UKV8 859 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
PRPF38B-202ENST00000370022 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 TISP43B9A030 160 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 PSMA7O14818 248 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 INPPL1O15357 1258 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 CALUO43852 315 aaPredicted RBP16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 CLTAP09496 248 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 FGFR1P11362 822 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 ISM2Q6H9L7 571 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 THNSL1Q8IYQ7 743 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 CMTR2Q8IYT2 770 aaKnown RBP16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 LPPQ93052 612 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 APOL6Q9BWW8 343 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 MRPL9Q9BYD2 267 aaKnown RBP16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 IKZF4Q9H2S9 585 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 KIAA1586Q9HCI6 787 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 PARP2Q9UGN5 583 aa16.95■□□□□ 0.3
PRPF38B-202ENST00000370022 FAM189A1O60320 539 aa16.94■□□□□ 0.3
PRPF38B-202ENST00000370022 OFD1O75665 1012 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms