RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 LMO3Q8TAP4 145 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 PRCCQ92733 491 aaPredicted RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 C9orf72Q96LT7 481 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 KREMEN1Q96MU8 473 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 TEKT3Q9BXF9 490 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 INTUQ9ULD6 942 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 NCANO14594 1321 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 RIPK2O43353 540 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CIITAP33076 1130 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 KRT17Q04695 432 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 YTHDF3Q7Z739 585 aaKnown RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 EPS8L1Q8TE68 723 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■■■■ 64.2
LRIF1-201ENST00000369763 CCT6BQ92526 530 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ARHGEF2Q92974 986 aaKnown RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 TLCD1Q96CP7 247 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CDK5RAP2Q96SN8 1893 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CCT8L1PA6NM43 557 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ALAS1P13196 640 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ACCSLQ4AC99 568 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 EMC10Q5UCC4 262 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 KAZNQ674X7 775 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 LDHDQ86WU2 507 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 TAS1R2Q8TE23 839 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 SYT11Q9BT88 431 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CDC42EP4Q9H3Q1 356 aaKnown RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CXorf56Q9H5V9 222 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ODF2LQ9ULJ1 636 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 SYNGAP1Q96PV0 1343 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TMEM120BA0PK00 339 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 A8MUI8 341 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TOM1O60784 492 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 CHRNB2P17787 502 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 KCNJ2P63252 427 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 RASA3Q14644 834 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SLC13A5Q86YT5 568 aaPredicted RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SGSM3Q96HU1 749 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 MTUS1Q9ULD2 1270 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 PFASO15067 1338 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 FRMPD4Q14CM0 1322 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ECEL1O95672 775 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 CHRNA3P32297 505 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ADCY8P40145 1251 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 EIF3BP55884 814 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 AUHQ13825 339 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 UGCGQ16739 394 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 EXOC3L1Q86VI1 746 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 CCDC63Q8NA47 563 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ACSF2Q96CM8 615 aaPredicted RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ZNF317Q96PQ6 595 aaPredicted RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 COL20A1Q9P218 1284 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 CCPG1Q9ULG6 757 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TTC7AQ9ULT0 858 aaPredicted RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 UBOX5O94941 541 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 DHX34Q14147 1143 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 SLC5A5Q92911 643 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 HAUS1Q96CS2 278 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 CNOT10Q9H9A5 744 aaKnown RBP11.68□□□□□ -0.54
LRIF1-201ENST00000369763 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
LRIF1-201ENST00000369763 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
LRIF1-201ENST00000369763 PEX5P50542 639 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 KIF22Q14807 665 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 SWT1Q5T5J6 900 aaKnown RBP11.67□□□□□ -0.54
LRIF1-201ENST00000369763 SPOPLQ6IQ16 392 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 TXLNGYQ9BZA5 131 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 R3HDM2Q9Y2K5 976 aaKnown RBP11.67□□□□□ -0.54
LRIF1-201ENST00000369763 FAM187AA6NFU0 413 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 PI4K2BG5E9Z4 385 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 RGL2O15211 777 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 THAP12O43422 761 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 SPAG7O75391 227 aa11.67□□□□□ -0.54
LRIF1-201ENST00000369763 PSMC4P43686 418 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms