RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 NIFKQ9BYG3 293 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 TCP11L1Q9NUJ3 509 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF624Q9P2J8 865 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CROTQ9UKG9 612 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 NSFL1CQ9UNZ2 370 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF148Q9UQR1 794 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 PDHXO00330 501 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CASQ2O14958 399 aaPredicted RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KDM1AO60341 852 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KCNJ13O60928 360 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ATP6V1G1O75348 118 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SASH3O75995 380 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ASMTLO95671 621 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SSBP05455 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 FBLN1P23142 703 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CCT6AP40227 531 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 MAN2A2P49641 1150 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 LRRC74AQ0VAA2 488 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SGCGQ13326 291 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SNX1Q13596 522 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CUL4BQ13620 913 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KCNB1Q14721 858 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 GRM3Q14832 879 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CAVIN4Q5BKX8 364 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 OSTM1Q86WC4 334 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TCEAL8Q8IYN2 117 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CCAR2Q8N163 923 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 MSANTD4Q8NCY6 345 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CFAP36Q96G28 342 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SAMD11Q96NU1 681 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 NUDT16L1Q9BRJ7 211 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ELAC1Q9H777 363 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 EBF2Q9HAK2 575 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SIRT5Q9NXA8 310 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 WDR35Q9P2L0 1181 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 PHTF1Q9UMS5 762 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 GPR52Q9Y2T5 361 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TACC3Q9Y6A5 838 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 GOLGA6L7A0A1B0GV03 622 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TARSL2A2RTX5 802 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SPDYE16A6NNV3 312 aaPredicted RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 B4DLN1 442 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 BIRC5O15392 142 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TTI1O43156 1089 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 MTSS1O43312 755 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KLF4O43474 513 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ENTPD3O75355 529 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 NPTXRO95502 500 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SYT1P21579 422 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 DNAJB1P25685 340 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 STAT3P40763 770 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 RGS2P41220 211 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ATP5OP48047 213 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 PRKCZQ05513 592 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ITKQ08881 620 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 RAB33AQ14088 237 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 NAA25Q14CX7 972 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 BBS9Q3SYG4 887 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ANKDD1AQ495B1 522 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 PABPC1LQ4VXU2 614 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 Q7L0L9 218 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 HS2ST1Q7LGA3 356 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 DGLUCYQ7Z3D6 616 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 STRA8Q7Z7C7 330 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF454Q8N9F8 522 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SHCBP1Q8NEM2 672 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 FBXO22Q8NEZ5 403 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 FATE1Q969F0 183 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ZDHHC15Q96MV8 337 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 FNBP1Q96RU3 617 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 CORO1BQ9BR76 489 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ACAD9Q9H845 621 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 KIAA1586Q9HCI6 787 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF70Q9UC06 446 aaPredicted RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TUBGCP4Q9UGJ1 667 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 TRMT112Q9UI30 125 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 MSRAQ9UJ68 235 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 HOOK1Q9UJC3 728 aaKnown RBP5.47□□□□□ -1.53
UBE3D-202ENST00000369746 RAB21Q9UL25 225 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 RFX7Q2KHR2 1363 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 ZSWIM8A7E2V4 1837 aa5.47□□□□□ -1.53
UBE3D-202ENST00000369746 FAM221AA4D161 298 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 GOLGA6L4A6NEF3 574 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 SLC15A5A6NIM6 579 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 F6X3S4 739 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 ZBTB39O15060 712 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 WDR46O15213 610 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 TROVE2P10155 538 aaKnown RBP eCLIP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 MYBP10242 640 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 ATP1A3P13637 1013 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 PTGS1P23219 599 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 CDC25CP30307 473 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 HOXC12P31275 282 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 NR2C2P49116 596 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms