RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 NFIXQ14938 502 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 CEP55Q53EZ4 464 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 FRA10AC1Q70Z53 315 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 BZW1Q7L1Q6 419 aaKnown RBP14.63□□□□□ -0.07
HIPK1-205ENST00000369558 TUBB6Q9BUF5 446 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 TMEM60Q9H2L4 133 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 GRID2IPA4D2P6 1211 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
HIPK1-205ENST00000369558 SLC18A3Q16572 532 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 AGPAT1Q99943 283 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 SETBP1Q9Y6X0 1596 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 E2F8A0AVK6 867 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 SDC4P31431 198 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 RPAP3Q9H6T3 665 aaPredicted RBP14.63□□□□□ -0.07
HIPK1-205ENST00000369558 HOXC10Q9NYD6 342 aa14.63□□□□□ -0.07
HIPK1-205ENST00000369558 USP11P51784 963 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 CACNB2Q08289 660 aaPredicted RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 DDX42Q86XP3 938 aaKnown RBP eCLIP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 RHOT1Q8IXI2 618 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 CYFIP2Q96F07 1278 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 KRT76Q01546 638 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 ROR1Q01973 937 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 MTMR2Q13614 643 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 PODNQ7Z5L7 613 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 LDHDQ86WU2 507 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 CEP70Q8NHQ1 597 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 AGAP3Q96P47 875 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 TRPV6Q9H1D0 765 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 MTMR4Q9NYA4 1195 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 STRIP2Q9ULQ0 834 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 GRAP2O75791 330 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 COPB2P35606 906 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 PHKA2P46019 1235 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 KPNA2P52292 529 aaKnown RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 BCAR1P56945 870 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 NUMA1Q14980 2115 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 HIF1AQ16665 826 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 AFG1LQ8WV93 481 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 BTBD6Q96KE9 485 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 YIPF3Q9GZM5 350 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 IP6K2Q9UHH9 426 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 GALCP54803 685 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 NUDCD3Q8IVD9 361 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 UPF3AQ9H1J1 476 aaKnown RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 PHF20L1A8MW92 1017 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 CTIFO43310 598 aaKnown RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 UCHL3P15374 230 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 SLC9A1P19634 815 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 TRIML2Q8N7C3 387 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 NCLNQ969V3 563 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 ABT1Q9ULW3 272 aaKnown RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 H3BRJ5 948 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 ZBTB24O43167 697 aaPredicted RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 TBXAS1P24557 533 aaPredicted RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 SEL1LQ9UBV2 794 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 MARCOQ9UEW3 520 aaPredicted RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 PSMC5P62195 406 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 PPP1R18Q6NYC8 613 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 ZNF507Q8TCN5 953 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 VPS39Q96JC1 886 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 MRPL4Q9BYD3 311 aaKnown RBP14.62□□□□□ -0.07
HIPK1-205ENST00000369558 KIAA1586Q9HCI6 787 aa14.62□□□□□ -0.07
HIPK1-205ENST00000369558 GPD1LQ8N335 351 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 TTC25Q96NG3 672 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
HIPK1-205ENST00000369558 MYH10P35580 1976 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 MOCS2O96007 188 aaPredicted RBP14.61□□□□□ -0.07
HIPK1-205ENST00000369558 STMN1P16949 149 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 PAMP19021 973 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 KDSRQ06136 332 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 LRRC36Q1X8D7 754 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 RNF168Q8IYW5 571 aaPredicted RBP14.61□□□□□ -0.07
HIPK1-205ENST00000369558 ADSSL1Q8N142 457 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 DRC3Q9H069 523 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 NPHS2Q9NP85 383 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 KCNN4O15554 427 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 SRGNP10124 158 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 HMGCS2P54868 508 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 DUOXA2Q1HG44 320 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 P3H1Q32P28 736 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 WDR72Q3MJ13 1102 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 PLA2G4FQ68DD2 849 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 PARVAQ9NVD7 372 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 SMTNL2Q2TAL5 461 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 TSC22D3Q99576 134 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 THEGQ9P2T0 379 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 FAM8A1Q9UBU6 413 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
HIPK1-205ENST00000369558 KRT7P08729 469 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 CAPRIN1Q14444 709 aaKnown RBP14.61□□□□□ -0.07
HIPK1-205ENST00000369558 MORF4L2Q15014 288 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 EPC2Q52LR7 807 aa14.61□□□□□ -0.07
HIPK1-205ENST00000369558 RASSF3Q86WH2 238 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms