RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ASPRV1Q53RT3 343 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TBC1D9BQ66K14 1250 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TRIM68Q6AZZ1 485 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 GJB7Q6PEY0 223 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 BICDL1Q6ZP65 573 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 RGS9BPQ6ZS82 235 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ANKRD42Q8N9B4 389 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 FAM13CQ8NE31 585 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 EYA3Q99504 573 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MYLK2Q9H1R3 596 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TLE6Q9H808 572 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 KCNK9Q9NPC2 374 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 POTECB2RU33 542 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MARCH6O60337 910 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ECE2O60344 883 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ECEL1O95672 775 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 GSTA2P09210 222 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ABCB4P21439 1286 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 GSTO1P78417 241 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 CAV1Q03135 178 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 GIT2Q14161 759 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 DRAP1Q14919 205 aaPredicted RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SYDE1Q6ZW31 735 aaPredicted RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC13A5Q86YT5 568 aaPredicted RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 SH3RF3Q8TEJ3 882 aaPredicted RBP11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 DNAJC9Q8WXX5 260 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MKNK1Q9BUB5 465 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 THAP2Q9H0W7 228 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 WDR35Q9P2L0 1181 aa11.27□□□□□ -0.61
LYSMD1-201ENST00000368908 MAPK13O15264 365 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 TTC4O95801 387 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 CREB1P16220 341 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 IL9RQ01113 521 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 MPP2Q14168 576 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SIX1Q15475 284 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC4A8Q2Y0W8 1093 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 RIBC1Q8N443 379 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 RBBP8NLQ8NC74 664 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 IFT43Q96FT9 208 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 BICD1Q96G01 975 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 NUDCD1Q96RS6 583 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 GPR88Q9GZN0 384 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 LRRC19Q9H756 370 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 DCLRE1BQ9H816 532 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 DNAJC12Q9UKB3 198 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 ITIH2P19823 946 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 DRAXINQ8NBI3 349 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 KRT35Q92764 455 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 CD101Q93033 1021 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 COA7Q96BR5 231 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 CRAMP1Q96RY5 1269 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 SYT15Q9BQS2 421 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 PITPNM3Q9BZ71 974 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 ZMYND8Q9ULU4 1186 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-201ENST00000368908 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 CDH16O75309 829 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 KLRK1P26718 216 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 MAN1A1P33908 653 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 CDK8P49336 464 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC18A1P54219 525 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 MOGSQ13724 837 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 GNPTABQ3T906 1256 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 TMEM154Q6P9G4 183 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 CCDC25Q86WR0 208 aa11.25□□□□□ -0.61
LYSMD1-201ENST00000368908 SYT2Q8N9I0 419 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms