RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 PPM1LQ5SGD2 360 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 TANGO2Q6ICL3 276 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-201ENST00000368657 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 MAP4K3Q8IVH8 894 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 RNF168Q8IYW5 571 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-201ENST00000368657 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 ESR2Q92731 530 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-201ENST00000368657 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 DOCK6Q96HP0 2047 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 PIEZO2Q9H5I5 2752 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 SPTA1P02549 2419 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 UPK3BL1B0FP48 263 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 UPK3BL2E5RIL1 263 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 CAPN9O14815 690 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 ATG7O95352 703 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 EFEMP2O95967 443 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 POU2F2P09086 479 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 ITGB5P18084 799 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 CCNE1P24864 410 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 TMOD1P28289 359 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 ACTR2P61160 394 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 CUL5Q93034 780 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 LPPQ93052 612 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 ZKSCAN3Q9BRR0 538 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 DUSP15Q9H1R2 295 aaPredicted RBP11.76□□□□□ -0.53
TUBE1-201ENST00000368657 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 ZNF462Q96JM2 2506 aa11.76□□□□□ -0.53
TUBE1-201ENST00000368657 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 MAGEB2O15479 319 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 C22orf31O95567 290 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 FGAP02671 866 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
TUBE1-201ENST00000368657 RAB27AP51159 221 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 UVSSAQ2YD98 709 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
TUBE1-201ENST00000368657 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 MCRS1Q96EZ8 462 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 RNF41Q9H4P4 317 aaPredicted RBP11.75□□□□□ -0.53
TUBE1-201ENST00000368657 ZFP14Q9HCL3 533 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 PKD2L1Q9P0L9 805 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
TUBE1-201ENST00000368657 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
TUBE1-201ENST00000368657 URB1O60287 2271 aaKnown RBP11.74□□□□□ -0.53
TUBE1-201ENST00000368657 ACACAQ13085 2346 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 A0A087WV48 116 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 IGKV6D-21A0A0A0MT36 114 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 ZBTB42B2RXF5 422 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 B4GALT3O60512 393 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 PSMC3P17980 439 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 HNRNPDQ14103 355 aaKnown RBP11.74□□□□□ -0.53
TUBE1-201ENST00000368657 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 LONRF3Q496Y0 759 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 CCNI2Q6ZMN8 369 aaPredicted RBP11.74□□□□□ -0.53
TUBE1-201ENST00000368657 RTL10Q7L3V2 364 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 PIP4P1Q86T03 277 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 SCUBE3Q8IX30 993 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 STAG2Q8N3U4 1231 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 SDF4Q9BRK5 362 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 APOL6Q9BWW8 343 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 C8orf33Q9H7E9 229 aaPredicted RBP11.74□□□□□ -0.53
TUBE1-201ENST00000368657 RBM12Q9NTZ6 932 aaKnown RBP11.74□□□□□ -0.53
TUBE1-201ENST00000368657 FBXW11Q9UKB1 542 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 NFASCO94856 1347 aa11.74□□□□□ -0.53
TUBE1-201ENST00000368657 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 CCL16O15467 120 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 NR1I2O75469 434 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 GDI1P31150 447 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 LMAN2Q12907 356 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 GRM2Q14416 872 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 TWF2Q6IBS0 349 aaKnown RBP11.73□□□□□ -0.53
TUBE1-201ENST00000368657 AGMOQ6ZNB7 445 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 GLYCTKQ8IVS8 523 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 CAMKK1Q8N5S9 505 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 MDM1Q8TC05 714 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 PIGSQ96S52 555 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 AVENQ9NQS1 362 aaPredicted RBP11.73□□□□□ -0.53
TUBE1-201ENST00000368657 FAM105AQ9NUU6 356 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 C2orf42Q9NWW7 574 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 MARCH5Q9NX47 278 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms