RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 FBXL6Q8N531 539 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 CUEDC2Q9H467 287 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ATP6V0A4Q9HBG4 840 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 TBC1D22BQ9NU19 505 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 KBTBD4Q9NVX7 518 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ZDBF2Q9HCK1 2354 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 LAG3P18627 525 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 CLCN3P51790 818 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 VCPP55072 806 aaKnown RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 NLRP11P59045 1033 aaKnown RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 ASIC1P78348 528 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 SIGLEC14Q08ET2 396 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 TMEM119Q4V9L6 283 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ODR4Q5SWX8 454 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 SPOUT1Q5T280 376 aaKnown RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 KCNK18Q7Z418 384 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 THNSL1Q8IYQ7 743 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 ZNF577Q9BSK1 485 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 BLOC1S4Q9NUP1 217 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 FANCLQ9NW38 375 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 CDH22Q9UJ99 828 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 CTNND2Q9UQB3 1225 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 GDAQ9Y2T3 454 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 PPP1R3GB7ZBB8 358 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
TPM3-210ENST00000368530 EIF4BP23588 611 aaKnown RBP10.98□□□□□ -0.65
TPM3-210ENST00000368530 PBX3P40426 434 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 CLLU1OSQ5K130 101 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 PLPP4Q5VZY2 271 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 SV2BQ7L1I2 683 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
TPM3-210ENST00000368530 ECHDC2Q86YB7 292 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 SMAP1Q8IYB5 467 aaPredicted RBP10.98□□□□□ -0.65
TPM3-210ENST00000368530 METTL13Q8N6R0 699 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 RAD54LQ92698 747 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 TCF25Q9BQ70 676 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 HSD3B7Q9H2F3 369 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 IFNKQ9P0W0 207 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 GABBR1Q9UBS5 961 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 STK17AQ9UEE5 414 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 MAPK8IP1Q9UQF2 711 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 PCDHA10Q9Y5I2 948 aa10.98□□□□□ -0.65
TPM3-210ENST00000368530 ESPNB1AK53 854 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 TBX3O15119 743 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 MAGEB2O15479 319 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 CHMP2AO43633 222 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 KLRC4O43908 158 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 MED24O75448 989 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 AVPR2P30518 371 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 PTPN5P54829 565 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 FANCCQ00597 558 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 ZNF658Q5TYW1 1059 aaPredicted RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 DYMQ7RTS9 669 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 TRMT1LQ7Z2T5 733 aaKnown RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 LRRC71Q8N4P6 559 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 MRPL43Q8N983 215 aaKnown RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 MED15Q96RN5 788 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 APOL5Q9BWW9 433 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 TRIM9Q9C026 710 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 XPO4Q9C0E2 1151 aaKnown RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 NGRNQ9NPE2 291 aaKnown RBP10.97□□□□□ -0.65
TPM3-210ENST00000368530 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 NFE2L3Q9Y4A8 694 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 EVPLQ92817 2033 aa10.97□□□□□ -0.65
TPM3-210ENST00000368530 A0A0U1RQF3 1178 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 C2orf71A6NGG8 1288 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 MYMKA6NI61 221 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 GOLGA6L6A8MZA4 724 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 E9PMD0 336 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 STBD1O95210 358 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 SERPINC1P01008 464 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 PDGFBP01127 241 aaPredicted RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 PSAPP07602 524 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 HOXB8P17481 243 aaPredicted RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 ERCC5P28715 1186 aaPredicted RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 GPC3P51654 580 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 SETQ01105 290 aaPredicted RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 AMPD3Q01432 767 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 SPIRE1Q08AE8 756 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 TARBP2Q15633 366 aaKnown RBP10.96□□□□□ -0.65
TPM3-210ENST00000368530 UGCGQ16739 394 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 HS1BP3Q53T59 392 aa10.96□□□□□ -0.65
TPM3-210ENST00000368530 LLGL2Q6P1M3 1020 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms