RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 DPYDQ12882 1025 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
LMNA-204ENST00000368298 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
LMNA-204ENST00000368298 ZNF697Q5TEC3 545 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 HACE1Q8IYU2 909 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 FIBCD1Q8N539 461 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 RNF169Q8NCN4 708 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 LPPQ93052 612 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 SEMA6BQ9H3T3 888 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 NXF3Q9H4D5 531 aaKnown RBP20.47■□□□□ 0.87
LMNA-204ENST00000368298 TBC1D7Q9P0N9 293 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 GIT1Q9Y2X7 761 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 HES2Q9Y543 173 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 FSD2A1L4K1 749 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 TBKBP1A7MCY6 615 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 GCNT3O95395 438 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 CASP5P51878 434 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 MCL1Q07820 350 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 PSMD2Q13200 908 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 FAM26FQ5R3K3 315 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 GLB1LQ6UWU2 654 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 STXBP4Q6ZWJ1 553 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 EPM2AIP1Q7L775 607 aaPredicted RBP20.46■□□□□ 0.87
LMNA-204ENST00000368298 ABI1Q8IZP0 508 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 SAMD11Q96NU1 681 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 TGS1Q96RS0 853 aaKnown RBP20.46■□□□□ 0.87
LMNA-204ENST00000368298 FGFBP2Q9BYJ0 223 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 CDT1Q9H211 546 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 STYXL1Q9Y6J8 313 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 RALGAPA2Q2PPJ7 1873 aa20.46■□□□□ 0.87
LMNA-204ENST00000368298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.45■□□□□ 0.86
LMNA-204ENST00000368298 EIF3DO15371 548 aaKnown RBP eCLIP20.45■□□□□ 0.86
LMNA-204ENST00000368298 PRR29P0C7W0 189 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 MYBP10242 640 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.86
LMNA-204ENST00000368298 ZNF568Q3ZCX4 644 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 HELQQ8TDG4 1101 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 ZBTB45Q96K62 511 aaPredicted RBP20.45■□□□□ 0.86
LMNA-204ENST00000368298 ACCSQ96QU6 501 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 MRPL9Q9BYD2 267 aaKnown RBP20.45■□□□□ 0.86
LMNA-204ENST00000368298 RWDD3Q9Y3V2 267 aa20.45■□□□□ 0.86
LMNA-204ENST00000368298 HNRNPDLO14979 420 aaKnown RBP20.44■□□□□ 0.86
LMNA-204ENST00000368298 CLDN3O15551 220 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 RPN1P04843 607 aaKnown RBP20.44■□□□□ 0.86
LMNA-204ENST00000368298 GRM5P41594 1212 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 LIG4P49917 911 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 KCNA1Q09470 495 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 POSTNQ15063 836 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 KMT5BQ4FZB7 885 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 NOMO2Q5JPE7 1267 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 SLC39A4Q6P5W5 647 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 LRRC55Q6ZSA7 311 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 Q7L0L9 218 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 ZNF507Q8TCN5 953 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 HPS3Q969F9 1004 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 BICD1Q96G01 975 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 TCHPQ9BT92 498 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 KANSL3Q9P2N6 904 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 EXOC7Q9UPT5 735 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 MRPL42Q9Y6G3 142 aaKnown RBP20.44■□□□□ 0.86
LMNA-204ENST00000368298 NLRC5Q86WI3 1866 aa20.44■□□□□ 0.86
LMNA-204ENST00000368298 C5orf67F2Z3F1 127 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 RHOBTB3O94955 611 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 KCNB1Q14721 858 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
LMNA-204ENST00000368298 ZSCAN23Q3MJ62 389 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 PAN2Q504Q3 1202 aaKnown RBP20.43■□□□□ 0.86
LMNA-204ENST00000368298 LRRC43Q8N309 656 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 GLIS3Q8NEA6 775 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 SPATA20Q8TB22 786 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 HAPLN2Q9GZV7 340 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 CWH43Q9H720 699 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 TMEM206Q9H813 350 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 TYW1Q9NV66 732 aaKnown RBP20.43■□□□□ 0.86
LMNA-204ENST00000368298 TMEM63CQ9P1W3 806 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 A0A0B4J269 797 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 ARL5CA6NH57 179 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 AKAP5P24588 427 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 BMPR1AP36894 532 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 SLFN12LQ6IEE8 588 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 GSTCDQ8NEC7 633 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 SYAP1Q96A49 352 aaPredicted RBP20.43■□□□□ 0.86
LMNA-204ENST00000368298 EXOC1Q9NV70 894 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 SNTG2Q9NY99 539 aa20.43■□□□□ 0.86
LMNA-204ENST00000368298 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
LMNA-204ENST00000368298 UBE4BO95155 1302 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 ANKRD63C9JTQ0 380 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 FAM189A1O60320 539 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 KINO60870 393 aaKnown RBP20.42■□□□□ 0.86
LMNA-204ENST00000368298 PRPF6O94906 941 aaKnown RBP20.42■□□□□ 0.86
LMNA-204ENST00000368298 RB1P06400 928 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 AFF1P51825 1210 aaKnown RBP20.42■□□□□ 0.86
LMNA-204ENST00000368298 ZNF445P59923 1031 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 KYAT1Q16773 422 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 SPRED2Q7Z698 418 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 ZBTB33Q86T24 672 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 TMEM192Q8IY95 271 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms