RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 OSBP2Q969R2 916 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 DDX11Q96FC9 970 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 USP28Q96RU2 1077 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 SEC62Q99442 399 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 MOV10L1Q9BXT6 1211 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 NACAP1Q9BZK3 213 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 TRPV6Q9H1D0 765 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ATXN3LQ9H3M9 355 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 RNF41Q9H4P4 317 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 DNAJC18Q9H819 358 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ORC3Q9UBD5 711 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 MTUS1Q9ULD2 1270 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 PCDHA7Q9UN72 937 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 PCDHA4Q9UN74 947 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 TLR6Q9Y2C9 796 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ROBO3Q96MS0 1386 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 TEX15Q9BXT5 2789 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 COL12A1Q99715 3063 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 LOC730098B7Z3J9 87 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 MSTNO14793 375 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 GPAA1O43292 621 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 MBTPS2O43462 519 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 CUTAO60888 179 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 TIAF1O95411 115 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 BMP15O95972 392 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 PF4P02776 101 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ASGR1P07306 291 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 SLC3A2P08195 630 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ADH5P11766 374 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 FDPSP14324 419 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 U2AF2P26368 475 aaKnown RBP eCLIP7.28□□□□□ -1.248e-7■■■■□ 25.7
ECHDC1-202ENST00000368289 EIF4A3P38919 411 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 USP11P51784 963 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 RHBDL3P58872 404 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ERVK-21P61565 698 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 CBX2Q14781 532 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 PUM3Q15397 648 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 SAFBQ15424 915 aaKnown RBP eCLIP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 CLUL1Q15846 466 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 TCTN1Q2MV58 587 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 TCEAL5Q5H9L2 206 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 METTL24Q5JXM2 366 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 SNAP47Q5SQN1 464 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 DYMQ7RTS9 669 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 HDXQ7Z353 690 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF654Q8IZM8 581 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 DCLK2Q8N568 766 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 TRIML1Q8N9V2 468 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 FSIP1Q8NA03 581 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF384Q8TF68 577 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 NUP133Q8WUM0 1156 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ELMO3Q96BJ8 720 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 PABPC5Q96DU9 382 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 FAM46AQ96IP4 442 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 RHOVQ96L33 236 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 TCEANC2Q96MN5 208 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 PYM1Q9BRP8 204 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 AP4E1Q9UPM8 1137 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 PCDHB5Q9Y5E4 795 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF236Q9UL36 1845 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 SCN5AQ14524 2016 aa7.28□□□□□ -1.24
ECHDC1-202ENST00000368289 ANKRD17O75179 2603 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 KLF18A0A0U1RQI7 1052 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 GOLGA6L9A6NEM1 432 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 M0R2C6 588 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 AP5Z1O43299 807 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 BPNT1O95861 308 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 XBP1P17861 261 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 PTGS1P23219 599 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CST5P28325 142 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 METAP2P50579 478 aaKnown RBP eCLIP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 TUBB4BP68371 445 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CCT2P78371 535 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 GPNMBQ14956 572 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 PTPN14Q15678 1187 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 RSPO4Q2I0M5 234 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 FAM173BQ6P4H8 233 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CATSPERGQ6ZRH7 1159 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 NT5DC4Q86YG4 428 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CREBRFQ8IUR6 639 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 LURAP1LQ8IV03 231 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 FAM177A1Q8N128 213 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 KIF18AQ8NI77 898 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 PHOSPHO2Q8TCD6 241 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 ANKRD7Q92527 254 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 UTP4Q969X6 686 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 WDR89Q96FK6 387 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 UBL7Q96S82 380 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CNNM1Q9NRU3 951 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 CGNQ9P2M7 1197 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 TUBE1Q9UJT0 475 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 PCDHGC5Q9Y5F6 944 aa7.27□□□□□ -1.25
ECHDC1-202ENST00000368289 TAF6LQ9Y6J9 622 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms