RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MFSD14AQ96MC6 490 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 PSMB7Q99436 277 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 NAP1L3Q99457 506 aaPredicted RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 AGPAT1Q99943 283 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 LRRC1Q9BTT6 524 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 PDE11AQ9HCR9 933 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 PGRMC1O00264 195 aaKnown RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 KCNK3O14649 394 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 HNRNPDLO14979 420 aaKnown RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 STBD1O95210 358 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 TGFB3P10600 412 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 GZMAP12544 262 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 MAP2K2P36507 400 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 CCNA1P78396 465 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 ARHGAP44Q17R89 818 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 ZNF771Q7L3S4 317 aaPredicted RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 GPD1LQ8N335 351 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 TMEM117Q9H0C3 514 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 TXNRD2Q9NNW7 524 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 ARHGAP28Q9P2N2 729 aa15.14■□□□□ 0.01
USF1-202ENST00000368020 MAFBQ9Y5Q3 323 aaPredicted RBP15.14■□□□□ 0.01
USF1-202ENST00000368020 TMEM150BA6NC51 233 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 FOXN3O00409 490 aaPredicted RBP15.13■□□□□ 0.01
USF1-202ENST00000368020 RFC5P40937 340 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
USF1-202ENST00000368020 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 DLG4P78352 724 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 STRN3Q13033 797 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 PAK2Q13177 524 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 NEDD9Q14511 834 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 FAM110CQ1W6H9 321 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 C1orf220Q5T0J3 134 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 SLFN12LQ6IEE8 588 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 CCDC60Q8IWA6 550 aaPredicted RBP15.13■□□□□ 0.01
USF1-202ENST00000368020 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 FBXL13Q8NEE6 735 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 MORC4Q8TE76 937 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 EXOC4Q96A65 974 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 NT5C1BQ96P26 610 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 PAGR1Q9BTK6 254 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 MROH8Q9H579 483 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 PSD3Q9NYI0 1048 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 TMEM59LQ9UK28 342 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 TTC7AQ9ULT0 858 aaPredicted RBP15.13■□□□□ 0.01
USF1-202ENST00000368020 ADGRA2Q96PE1 1338 aa15.13■□□□□ 0.01
USF1-202ENST00000368020 TMCO5BA8MYB1 307 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 OATP04181 439 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 ADSSP30520 456 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
USF1-202ENST00000368020 NAMPTP43490 491 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 EMC2Q15006 297 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 TAF1CQ15572 869 aaPredicted RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 SMYD5Q6GMV2 418 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 FAM71AQ8IYT1 594 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 RASGEF1CQ8N431 466 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 CAVIN3Q969G5 261 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 BICD1Q96G01 975 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 HES6Q96HZ4 224 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.011e-13■■□□□ 11.9
USF1-202ENST00000368020 POLR3FQ9H1D9 316 aaPredicted RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 ISCUQ9H1K1 167 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 HPCAL4Q9UM19 191 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 LRRIQ3A6PVS8 624 aaPredicted RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 MIF4GDA9UHW6 222 aaKnown RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 TISP43B9A030 160 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 RTN2O75298 545 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 LRRN2O75325 713 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 LDHAP00338 332 aaKnown RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 ADRB2P07550 413 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 EDNRBP24530 442 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 Q3C1V9 767 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 C11orf63Q6NUN7 778 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 NT5DC3Q86UY8 548 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 CBWD2Q8IUF1 395 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 SLC35G2Q8TBE7 412 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 SHC3Q92529 594 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 FAM167AQ96KS9 214 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 NIFKQ9BYG3 293 aaKnown RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 GDF3Q9NR23 364 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 ST7Q9NRC1 585 aa15.12■□□□□ 0.01
USF1-202ENST00000368020 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
USF1-202ENST00000368020 IGKV6D-21A0A0A0MT36 114 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms