RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 C15orf39Q6ZRI6 1047 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 CCDC149Q6ZUS6 474 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 KREMEN2Q8NCW0 462 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 ADPGKQ9BRR6 497 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 RAB34Q9BZG1 259 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
CTSD-202ENST00000367196 HES2Q9Y543 173 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 DENND4AQ7Z401 1863 aa16.42■□□□□ 0.22
CTSD-202ENST00000367196 N4BP3O15049 544 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 MED24O75448 989 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 NPTXRO95502 500 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 GLUD1P00367 558 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
CTSD-202ENST00000367196 PTPN5P54829 565 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 NHLH1Q02575 133 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 MAPK6Q16659 721 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 TMC5Q6UXY8 1006 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 MAEAQ7L5Y9 396 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 GPR65Q8IYL9 337 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 C12orf76Q8N812 135 aaPredicted RBP16.41■□□□□ 0.22
CTSD-202ENST00000367196 FBXO18Q8NFZ0 1043 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 ASIC4Q96FT7 647 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 ZFP42Q96MM3 310 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTSD-202ENST00000367196 MARCH5Q9NX47 278 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
CTSD-202ENST00000367196 TRIOO75962 3097 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 C2CD2LO14523 706 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 B4GALT5O43286 388 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 LILRB3O75022 631 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 SEC24BO95487 1268 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 C1RP00736 705 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 NAMPTP43490 491 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 ZNF174Q15697 407 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 CYP26C1Q6V0L0 522 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 OTOP3Q7RTS5 596 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 APBB1IPQ7Z5R6 666 aaPredicted RBP16.4■□□□□ 0.22
CTSD-202ENST00000367196 GPR149Q86SP6 731 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
CTSD-202ENST00000367196 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 GPRC5CQ9NQ84 441 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 PARP2Q9UGN5 583 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 CDH22Q9UJ99 828 aa16.4■□□□□ 0.22
CTSD-202ENST00000367196 WEE2P0C1S8 567 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 AKAP5P24588 427 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTSD-202ENST00000367196 EFNA5P52803 228 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 NUBP1P53384 320 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 DSG1Q02413 1049 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.21
CTSD-202ENST00000367196 USP41Q3LFD5 358 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 RNF168Q8IYW5 571 aaPredicted RBP16.39■□□□□ 0.21
CTSD-202ENST00000367196 DEPTORQ8TB45 409 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 STAMQ92783 540 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 KIFAP3Q92845 792 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 IFT74Q96LB3 600 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 RHOBTB2Q9BYZ6 727 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 FZD8Q9H461 694 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 MAN1C1Q9NR34 630 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 ADAM28Q9UKQ2 775 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 KMT2EQ8IZD2 1858 aa16.39■□□□□ 0.21
CTSD-202ENST00000367196 LAD1O00515 517 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 TEX28O15482 410 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 PRKCBP05771 671 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 CCT6AP40227 531 aaKnown RBP16.38■□□□□ 0.21
CTSD-202ENST00000367196 FUT10Q6P4F1 479 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 PLEKHA4Q9H4M7 779 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 SF3B1O75533 1304 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTSD-202ENST00000367196 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
CTSD-202ENST00000367196 C2orf16Q68DN1 1984 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 A0A087WWV3 80 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 ACKR2O00590 384 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 TADA2AO75478 443 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 EFEMP2O95967 443 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 TUSC3Q13454 348 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 PDIA5Q14554 519 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 DCAF4L1Q3SXM0 396 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 KIAA0319Q5VV43 1072 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
CTSD-202ENST00000367196 CDR2LQ86X02 465 aaPredicted RBP16.37■□□□□ 0.21
CTSD-202ENST00000367196 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 FNIP2Q9P278 1114 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 MYO10Q9HD67 2058 aa16.37■□□□□ 0.21
CTSD-202ENST00000367196 PLXNA3P51805 1871 aa16.36■□□□□ 0.21
CTSD-202ENST00000367196 BRD1O95696 1058 aa16.36■□□□□ 0.21
CTSD-202ENST00000367196 THP07101 528 aa16.36■□□□□ 0.21
CTSD-202ENST00000367196 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTSD-202ENST00000367196 MRE11P49959 708 aa16.36■□□□□ 0.21
CTSD-202ENST00000367196 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms