RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KCNK18Q7Z418 384 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 ZBTB8OSQ8IWT0 167 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DAW1Q8N136 415 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 SNX29Q8TEQ0 813 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 EDAQ92838 391 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KLHL5Q96PQ7 755 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 APOL5Q9BWW9 433 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 RAB34Q9BZG1 259 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 TRIM6Q9C030 488 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 CHST7Q9NS84 486 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 CDH22Q9UJ99 828 aa15.11■□□□□ 0.01
TNFRSF1A-202ENST00000366159 WDFY4Q6ZS81 3184 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 F8W810 466 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PRKCBP05771 671 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 OR1G1P47890 313 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 CLCN4P51793 760 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PPP2R5AQ15172 486 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 NAB2Q15742 525 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 MAPK6Q16659 721 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DTHD1Q6ZMT9 781 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 HACE1Q8IYU2 909 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 FEZF2Q8TBJ5 459 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 RPGRIP1Q96KN7 1286 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 HERC2P3Q9BVR0 1158 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DZANK1Q9NVP4 752 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PRG3Q9Y2Y8 225 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PTGESO14684 152 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 N4BP3O15049 544 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 EFNA5P52803 228 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 GRIK3Q13003 919 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 MAPK7Q13164 816 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KRT79Q5XKE5 535 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 EEF1DP3Q658K8 133 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 MCTP1Q6DN14 999 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 RINT1Q6NUQ1 792 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 GPR65Q8IYL9 337 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KCTD17Q8N5Z5 321 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 C12orf76Q8N812 135 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DEPTORQ8TB45 409 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 NECTIN4Q96NY8 510 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 RPS6KC1Q96S38 1066 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KIFC3Q9BVG8 833 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 POMKQ9H5K3 350 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 MRPL17Q9NRX2 175 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
TNFRSF1A-202ENST00000366159 TECTAO75443 2155 aa15.08■□□□□ 0.01
TNFRSF1A-202ENST00000366159 PAPLNO95428 1278 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 CA8P35219 290 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 ZXDAP98168 799 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 DSG1Q02413 1049 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 CUL4AQ13619 759 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 ARL6IP4Q66PJ3 421 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 KIAA1841Q6NSI8 718 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 CES5AQ6NT32 575 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 IFT74Q96LB3 600 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 FBXL18Q96ME1 805 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 PNMA5Q96PV4 448 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 COLEC11Q9BWP8 271 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 EMILIN2Q9BXX0 1053 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 GPR62Q9BZJ7 368 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 SNTG2Q9NY99 539 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
TNFRSF1A-202ENST00000366159 TEX28O15482 410 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 C1RP00736 705 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 KLRC2P26717 231 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 MTHFRP42898 656 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 NPTX2P47972 431 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 RARS2Q5T160 578 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 HFE2Q6ZVN8 426 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 TAS1R3Q7RTX0 852 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 BMP8AQ7Z5Y6 402 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 PAAF1Q9BRP4 392 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 NTPCRQ9BSD7 190 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 TMEM134Q9H6X4 195 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 PTPRHQ9HD43 1115 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 ARHGAP28Q9P2N2 729 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 ADAM28Q9UKQ2 775 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 TNFSF13BQ9Y275 285 aa15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-202ENST00000366159 DENND4AQ7Z401 1863 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 H3BQV1 296 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 K7ERI5 159 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 HIP1RO75146 1068 aa15.06■□□□□ 0
TNFRSF1A-202ENST00000366159 NR1I2O75469 434 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms