RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 PDXDC1Q6P996 788 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 ZNF34Q8IZ26 560 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 MMGT1Q8N4V1 131 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 RBBP8NLQ8NC74 664 aaPredicted RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 NELL2Q99435 816 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TJP3O95049 919 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 PGM3O95394 542 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 SCNN1AP37088 669 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 VHLP40337 213 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 MAGEA1P43355 309 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 CRKLP46109 303 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 R3HDM1Q15032 1099 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 STK11Q15831 433 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TMTC4Q5T4D3 741 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 C2CD5Q86YS7 1000 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TMEM151BQ8IW70 566 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 NPLOC4Q8TAT6 608 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 NDFIP2Q9NV92 336 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 MRPS23Q9Y3D9 190 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 A0A0J9YVX5 310 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 SMIM22K7EJ46 135 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 VAV1P15498 845 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TNFAIP3P21580 790 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 EPHB2P29323 1055 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 USP11P51784 963 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 COPB1P53618 953 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 ANTXR2P58335 489 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 ZNF844Q08AG5 666 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 NFIAQ12857 509 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 BYSLQ13895 437 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 SAFBQ15424 915 aaKnown RBP eCLIP9.68□□□□□ -0.86
CALD1-201ENST00000361675 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 CEP78Q5JTW2 689 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 RALYLQ86SE5 291 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 DEPTORQ8TB45 409 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 AZI2Q9H6S1 392 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 MRPL40Q9NQ50 206 aaKnown RBP9.68□□□□□ -0.86
CALD1-201ENST00000361675 CNNM1Q9NRU3 951 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 TUBE1Q9UJT0 475 aa9.68□□□□□ -0.86
CALD1-201ENST00000361675 RFX7Q2KHR2 1363 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ZW10O43264 779 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 MGEA5O60502 916 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ATP6V1B1P15313 513 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ANXA13P27216 316 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 RTP1P59025 263 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 MRPS5P82675 430 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 PLOD1Q02809 727 aaPredicted RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 GFPT1Q06210 699 aaPredicted RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SLC2A7Q6PXP3 512 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 TMC4Q7Z404 712 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 LINC00469Q8N7U9 141 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 CAVIN3Q969G5 261 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SPATA16Q9BXB7 569 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 FAM129AQ9BZQ8 928 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 CNOT10Q9H9A5 744 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 NHEJ1Q9H9Q4 299 aaPredicted RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 SELENONQ9NZV5 590 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 KCNK3O14649 394 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 FDPSP14324 419 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 YY1P25490 414 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SOX11P35716 441 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 MTIF2P46199 727 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 NAA20P61599 178 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 HERVK_113P62684 666 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 BTG3Q14201 252 aaPredicted RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 GRAMD1BQ3KR37 738 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ILDR1Q86SU0 546 aaPredicted RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 EXOC3L1Q86VI1 746 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 CREG2Q8IUH2 290 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SLC15A3Q8IY34 581 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SH3TC2Q8TF17 1288 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 TRIM47Q96LD4 638 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ADD3Q9UEY8 706 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 ATPIF1Q9UII2 106 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 MYL3P08590 195 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 PDIA3P30101 505 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 STX2P32856 288 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 PMS2P54278 862 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 ZBTB16Q05516 673 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 KCNJ12Q14500 433 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 SLC39A14Q15043 492 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 CLUL1Q15846 466 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 PABPC1LQ4VXU2 614 aaKnown RBP9.67□□□□□ -0.86
CALD1-201ENST00000361675 AMIGO3Q86WK7 504 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 BBOF1Q8ND07 529 aa9.67□□□□□ -0.86
CALD1-201ENST00000361675 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms