RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 EMC2Q15006 297 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 STXBP2Q15833 593 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 SV2AQ7L0J3 742 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 DHX38Q92620 1227 aaKnown RBP21.66■■□□□ 1.06
CHD1L-201ENST00000361293 BICD1Q96G01 975 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 FAM213AQ9BRX8 229 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 R3HDMLQ9H3Y0 253 aa21.66■■□□□ 1.06
CHD1L-201ENST00000361293 ZNFX1Q9P2E3 1918 aaKnown RBP21.66■■□□□ 1.06
CHD1L-201ENST00000361293 ATMINO43313 823 aaPredicted RBP21.65■■□□□ 1.06
CHD1L-201ENST00000361293 GPC3P51654 580 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 XKR3Q5GH77 459 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 GPD1LQ8N335 351 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 FBXL13Q8NEE6 735 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 PI4K2AQ9BTU6 479 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 PSD3Q9NYI0 1048 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 NR2E1Q9Y466 385 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 KRIT1O00522 736 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 SART1O43290 800 aaKnown RBP21.65■■□□□ 1.06
CHD1L-201ENST00000361293 MMEP08473 750 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 GUCY2FP51841 1108 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 WNT7BP56706 349 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 RTP1P59025 263 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 BRDTQ58F21 947 aaPredicted RBP21.65■■□□□ 1.06
CHD1L-201ENST00000361293 LBX2Q6XYB7 198 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 TMC2Q8TDI7 906 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 TATDN2Q93075 761 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 RAB20Q9NX57 234 aa21.65■■□□□ 1.06
CHD1L-201ENST00000361293 OTOFQ9HC10 1997 aa21.64■■□□□ 1.06
CHD1L-201ENST00000361293 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 CALCAP01258 141 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 PAK2Q13177 524 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 LMBRD2Q68DH5 695 aaPredicted RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 CALR3Q96L12 384 aaKnown RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 IFT74Q96LB3 600 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 MAFBQ9Y5Q3 323 aaPredicted RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 ADM5C9JUS6 153 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 ALDH5A1P51649 535 aaPredicted RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 POLGP54098 1239 aaPredicted RBP21.64■■□□□ 1.05
CHD1L-201ENST00000361293 FMO1Q01740 532 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 CHST13Q8NET6 341 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 ASAP3Q8TDY4 903 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 ALG3Q92685 438 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 VTI1AQ96AJ9 217 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 ZNF302Q9NR11 478 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 CTTNBP2NLQ9P2B4 639 aa21.64■■□□□ 1.05
CHD1L-201ENST00000361293 FGGP02679 453 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 MFAP3P55082 362 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 ZNF211Q13398 564 aaPredicted RBP21.63■■□□□ 1.05
CHD1L-201ENST00000361293 NAA35Q5VZE5 725 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 CCDC125Q86Z20 511 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 DNERQ8NFT8 737 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 ZNF516Q92618 1163 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 AMACRQ9UHK6 382 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
CHD1L-201ENST00000361293 ATG7O95352 703 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 OATP04181 439 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 UBA1P22314 1058 aaKnown RBP21.63■■□□□ 1.05
CHD1L-201ENST00000361293 ECHS1P30084 290 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 ICAM3P32942 547 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 DDX42Q86XP3 938 aaKnown RBP eCLIP21.63■■□□□ 1.05
CHD1L-201ENST00000361293 NT5C1BQ96P26 610 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 HAPLN2Q9GZV7 340 aa21.63■■□□□ 1.05
CHD1L-201ENST00000361293 CYP11B1P15538 503 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 GARTP22102 1010 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 RHOT2Q8IXI1 618 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 ALG6Q9Y672 507 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 A0A0G2JMZ2 1700 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 RTN2O75298 545 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 MARCKSL1P49006 195 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 AADACL2Q6P093 401 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 ADAT2Q7Z6V5 191 aaKnown RBP21.62■■□□□ 1.05
CHD1L-201ENST00000361293 PCYT2Q99447 389 aa21.62■■□□□ 1.05
CHD1L-201ENST00000361293 PAPPA2Q9BXP8 1791 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 SOWAHBA6NEL2 793 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 TMEM110-MUSTN1A8MSY1 372 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 EDN1P05305 212 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 GLRA2P23416 452 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 LIG4P49917 911 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 GPC5P78333 572 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 NNTQ13423 1086 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 CPNE8Q86YQ8 564 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 ZBTB45Q96K62 511 aaPredicted RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 RNPC3Q96LT9 517 aaKnown RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 ZIM3Q96PE6 472 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 CEP89Q96ST8 783 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 DHX33Q9H6R0 707 aaKnown RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 COPB2P35606 906 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 ACOT2P49753 483 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 HADHBP55084 474 aaKnown RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 NLRP11P59045 1033 aaKnown RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 AFAP1L1Q8TED9 768 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 KRT35Q92764 455 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 SH3GL2Q99962 352 aa21.61■■□□□ 1.05
CHD1L-201ENST00000361293 CELF4Q9BZC1 486 aaKnown RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 TAF1DQ9H5J8 278 aaPredicted RBP21.61■■□□□ 1.05
CHD1L-201ENST00000361293 PTPRJQ12913 1337 aa21.6■■□□□ 1.05
CHD1L-201ENST00000361293 CCDC188H7C350 402 aa21.6■■□□□ 1.05
CHD1L-201ENST00000361293 GADL1Q6ZQY3 521 aa21.6■■□□□ 1.05
CHD1L-201ENST00000361293 EEPD1Q7L9B9 569 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms