RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 CLDN3O15551 220 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SLC9A1P19634 815 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CCND3P30281 292 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 HNRNPH3P31942 346 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PRMT2P55345 433 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MYL7Q01449 175 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PKN2Q16513 984 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CACNA2D4Q7Z3S7 1137 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 FDXACB1Q9BRP7 624 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ANKFY1Q9P2R3 1169 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 FBXL5Q9UKA1 691 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ADAMTS4O75173 837 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PGK1P00558 417 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 GNAT1P11488 350 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 HOXC8P31273 242 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 GTF2H1P32780 548 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MATR3P43243 847 aaKnown RBP eCLIP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 GPC3P51654 580 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CDK17Q00537 523 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PPP3CAQ08209 521 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CETN1Q12798 172 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PRPF4BQ13523 1007 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 KLHDC7AQ5VTJ3 777 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 E4F1Q66K89 784 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ZNF668Q96K58 619 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PRIMPOLQ96LW4 560 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MINDY3Q9H8M7 445 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 XPNPEP3Q9NQH7 507 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PLAGL2Q9UPG8 496 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 DAAM1Q9Y4D1 1078 aa22.8■■□□□ 1.24
MAP1LC3A-201ENST00000360668 C17orf102A2RUQ5 167 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 TTLL13PA6NNM8 815 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CYP2C9P11712 490 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PROZP22891 400 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 NLRP11P59045 1033 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 POLR2FP61218 127 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MCL1Q07820 350 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PSMD6Q15008 389 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 DNTTIP2Q5QJE6 756 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PDXDC1Q6P996 788 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 WDR59Q6PJI9 974 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SRGAP1Q7Z6B7 1085 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 NLRP7Q8WX94 980 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SIX2Q9NPC8 291 aa22.79■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SCN10AQ9Y5Y9 1956 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SOWAHDA6NJG2 315 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 LRRIQ3A6PVS8 624 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 KIF2AO00139 706 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ABLIM1O14639 778 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ACTN1P12814 892 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CST5P28325 142 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ATF7IP2Q5U623 682 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 TRIM65Q6PJ69 517 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CRELD2Q6UXH1 353 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 RRAGAQ7L523 313 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 C7orf31Q8N865 590 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 SYN2Q92777 582 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CCDC127Q96BQ5 260 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 PTPRHQ9HD43 1115 aa22.78■■□□□ 1.24
MAP1LC3A-201ENST00000360668 LRRC53A6NM62 1247 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 IQCF3P0C7M6 154 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 UCHL3P15374 230 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 GCLMP48507 274 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MXI1P50539 228 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 HIC1Q14526 733 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 AMHR2Q16671 573 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MPZL3Q6UWV2 235 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 RAD9BQ6WBX8 426 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 KLHDC9Q8NEP7 349 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 TCHPQ9BT92 498 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 INTS2Q9H0H0 1204 aaKnown RBP22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 ADAMTS10Q9H324 1103 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 TMEM8AQ9HCN3 771 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 HDAC6Q9UBN7 1215 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 MYO6Q9UM54 1294 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 TNFSF13BQ9Y275 285 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 CNTNAP2Q9UHC6 1331 aa22.77■■□□□ 1.24
MAP1LC3A-201ENST00000360668 OGTO15294 1046 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ACOT2P49753 483 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CLDN10P78369 228 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 APBA1Q02410 837 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 EPC2Q52LR7 807 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 RUFY4Q6ZNE9 571 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZNF710Q8N1W2 664 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SLAIN1Q8ND83 568 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 EHBP1Q8NDI1 1231 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SCLT1Q96NL6 688 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TMEM117Q9H0C3 514 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NLRC4Q9NPP4 1024 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 RBAKQ9NYW8 714 aaPredicted RBP22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 DDX20Q9UHI6 824 aaKnown RBP22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TRIM17Q9Y577 477 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 B4GALT5O43286 388 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZSCAN12O43309 604 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 FAM189A1O60320 539 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 KRT39Q6A163 491 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CXCL17Q6UXB2 119 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 LMO3Q8TAP4 145 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PPP1R16BQ96T49 567 aa22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CHP1Q99653 195 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms