RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 TMEM161AQ9NX61 479 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PALMO75781 387 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 CYP21A2P08686 494 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 ST8SIA6P61647 398 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 E4F1Q66K89 784 aaPredicted RBP10.23□□□□□ -0.77
CUX1-203ENST00000360264 CCNYL1Q8N7R7 359 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RMDN1Q96DB5 314 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
CUX1-203ENST00000360264 CFAP73A6NFT4 308 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 DRAP1Q14919 205 aaPredicted RBP10.23□□□□□ -0.77
CUX1-203ENST00000360264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.23□□□□□ -0.773e-7■■■■■ 94
CUX1-203ENST00000360264 PKD2L2Q9NZM6 624 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 GRIK1P39086 918 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 DMC1Q14565 340 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PLD3Q8IV08 490 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RASGRP4Q8TDF6 673 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 IGSF1Q8N6C5 1336 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 MYH7P12883 1935 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 RSPH10B2B2RC85 870 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 RSPH10BP0C881 870 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 RHOT1Q8IXI2 618 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 STKLD1Q8NE28 680 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ACRBPQ8NEB7 543 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 RAET1EQ8TD07 263 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 WWP1Q9H0M0 922 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 NDFIP2Q9NV92 336 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 NOVA2Q9UNW9 492 aaKnown RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 PRPF4O43172 522 aaKnown RBP eCLIP10.22□□□□□ -0.773e-6■■□□□ 11.6
CUX1-203ENST00000360264 CHGBP05060 677 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 UBXN2AP68543 259 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 CEP95Q96GE4 821 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 TSC22D3Q99576 134 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 FAM186AA6NE01 2351 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 MAGEB2O15479 319 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 DCAF4L1Q3SXM0 396 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 IER5Q5VY09 327 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 PLEKHM3Q6ZWE6 761 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 SPATA2LQ8IUW3 424 aaPredicted RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 KIF12Q96FN5 646 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ATPAF2Q8N5M1 289 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 PCYOX1LQ8NBM8 494 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ADA2Q9NZK5 511 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 CD4P01730 458 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ARHGEF7Q14155 803 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 ZNF589Q86UQ0 364 aaPredicted RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 NUGGCQ68CJ6 796 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 TTC30BQ8N4P2 665 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 CNOT8Q9UFF9 292 aaKnown RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 NPHP4O75161 1426 aaPredicted RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 SNTNA6NMZ2 147 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 PCSK1P29120 753 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 RAD54LQ92698 747 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 BHMT2Q9H2M3 363 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 TLR2O60603 784 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 SPAG6O75602 509 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 CASP8Q14790 479 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 AP1M1Q9BXS5 423 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 MFAP3LO75121 409 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 THNSL1Q8IYQ7 743 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 TOMM70O94826 608 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 EIF2AK2P19525 551 aaKnown RBP10.22□□□□□ -0.77
CUX1-203ENST00000360264 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 PCDHB6Q9Y5E3 794 aa10.22□□□□□ -0.77
CUX1-203ENST00000360264 KLHL2O95198 593 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 TMEM94Q12767 1356 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 BICRAQ9NZM4 1560 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 FAM170AA1A519 330 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
CUX1-203ENST00000360264 FTCDO95954 541 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.77
CUX1-203ENST00000360264 CSPG5O95196 566 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 SCFD2Q8WU76 684 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 FAM213AQ9BRX8 229 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 ZNF556Q9HAH1 456 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 CFAP69A5D8W1 941 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 ANGPT2O15123 496 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 MMEP08473 750 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 NPEPPSP55786 919 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 PSMC1P62191 440 aaKnown RBP10.21□□□□□ -0.77
CUX1-203ENST00000360264 C16orf89Q6UX73 402 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 CALML6Q8TD86 181 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 AGO2Q9UKV8 859 aaKnown RBP10.21□□□□□ -0.77
CUX1-203ENST00000360264 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 TYK2P29597 1187 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 RGS4P49798 205 aa10.21□□□□□ -0.77
CUX1-203ENST00000360264 STAT4Q14765 748 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms