RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RFX1P22670 979 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 JAK1P23458 1154 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 BLMHQ13867 455 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MDH1BQ5I0G3 518 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 POTEBQ6S5H4 581 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 GPR108Q9NPR9 543 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TMCO1Q9UM00 188 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PCDHB4Q9Y5E5 795 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 NPTXRO95502 500 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 DRAP1Q14919 205 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 P3H1Q32P28 736 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 IFNL3Q8IZI9 196 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 OR9Q1Q8NGQ5 310 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 OSBP2Q969R2 916 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 DCUN1D5Q9BTE7 237 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 JAG2Q9Y219 1238 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SLC34A1Q06495 639 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PDAP1Q13442 181 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MXD3Q9BW11 206 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MYLK2Q9H1R3 596 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 FBXO2Q9UK22 296 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 C21orf59P57076 290 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 EXOSC10Q01780 885 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 OCRLQ01968 901 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 FAM102BQ5T8I3 360 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ATL2Q8NHH9 583 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CMTM5Q96DZ9 223 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 GRIP2Q9C0E4 1043 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PLGRKTQ9HBL7 147 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PCP11498 1178 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 UBE3CQ15386 1083 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PCGF5Q86SE9 256 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 LPIN2Q92539 896 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ALKBH8Q96BT7 664 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SERPINB12Q96P63 405 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ATAD3AQ9NVI7 634 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PLEKP08567 350 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ATP2B4P23634 1241 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CCDC137Q6PK04 289 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SCG3Q8WXD2 468 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SNX25Q9H3E2 840 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 LGR6Q9HBX8 967 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TLK1Q9UKI8 766 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PFASO15067 1338 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TFRCP02786 760 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ITIH2P19823 946 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RAD54LQ92698 747 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 KCNB2Q92953 911 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RBM41Q96IZ5 413 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 FHDC1Q9C0D6 1143 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PLEKHG1Q9ULL1 1385 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ZBED1O96006 694 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RIPK1Q13546 671 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 KBTBD12Q3ZCT8 623 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TBC1D9BQ66K14 1250 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 MAEAQ7L5Y9 396 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 NCLNQ969V3 563 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RMND5BQ96G75 393 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 DCAF5Q96JK2 942 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PABPC3Q9H361 631 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 FIS1Q9Y3D6 152 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 MRC2Q9UBG0 1479 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 YTHDC2Q9H6S0 1430 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SHOX2O60902 331 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 MAPRE2Q15555 327 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 WLSQ5T9L3 541 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 KIAA1024Q9UPX6 916 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CAPN1P07384 714 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 DRD4P21917 467 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 GALK1P51570 392 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ODR4Q5SWX8 454 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PI16Q6UXB8 463 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 USP33Q8TEY7 942 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PPP1R14BQ96C90 147 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ERP44Q9BS26 406 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CD209Q9NNX6 404 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 OCM2P0CE71 109 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 OCMP0CE72 109 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 KRT76Q01546 638 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ITGB3BPQ13352 177 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 C16orf72Q14CZ0 275 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM63Q969Q1 353 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SMIM31A0A1B0GVY4 71 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CLIC2O15247 247 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 EFTUD2Q15029 972 aaKnown RBP eCLIP6.42□□□□□ -1.384e-6■■■■□ 25.8
VPS13B-203ENST00000358544 HIF1AQ16665 826 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 PLEKHA7Q6IQ23 1121 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 LRRC59Q96AG4 307 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CCDC127Q96BQ5 260 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TUBGCP3Q96CW5 907 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ABCF3Q9NUQ8 709 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 NMRK1Q9NWW6 199 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SAMD9Q5K651 1589 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms