RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 NLRP7Q8WX94 980 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 FAM49AQ9H0Q0 323 aaPredicted RBP18.56■□□□□ 0.56
TPM1-205ENST00000357980 GANQ9H2C0 597 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 GCNT4Q9P109 453 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 ZNF233A6NK53 670 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 GPR32O75388 356 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 GNAT1P11488 350 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 SLC9A1P19634 815 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 APBA1Q02410 837 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 KCNA10Q16322 511 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 ATF7IP2Q5U623 682 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 C17orf53Q8N3J3 647 aaPredicted RBP18.56■□□□□ 0.56
TPM1-205ENST00000357980 BAP1Q92560 729 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 PRIMPOLQ96LW4 560 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 NAA15Q9BXJ9 866 aaKnown RBP18.56■□□□□ 0.56
TPM1-205ENST00000357980 CEP72Q9P209 647 aa18.56■□□□□ 0.56
TPM1-205ENST00000357980 CNTNAP2Q9UHC6 1331 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 PMM2O15305 246 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 ARHGAP6O43182 974 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
TPM1-205ENST00000357980 LDHAP00338 332 aaKnown RBP18.55■□□□□ 0.56
TPM1-205ENST00000357980 ASGR1P07306 291 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 ACOT2P49753 483 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 MYL7Q01449 175 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 HSP90AA2PQ14568 343 aaPredicted RBP18.55■□□□□ 0.56
TPM1-205ENST00000357980 KIZQ2M2Z5 673 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 NBPF20Q3BBV1 942 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 ZBTB41Q5SVQ8 909 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 MPZL3Q6UWV2 235 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 SIX2Q9NPC8 291 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 PTCH2Q9Y6C5 1203 aa18.55■□□□□ 0.56
TPM1-205ENST00000357980 LRRIQ3A6PVS8 624 aaPredicted RBP18.54■□□□□ 0.56
TPM1-205ENST00000357980 P4HA2O15460 535 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 N4BP1O75113 896 aaKnown RBP18.54■□□□□ 0.56
TPM1-205ENST00000357980 ACTN1P12814 892 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 HSPA6P17066 643 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 GRK4P32298 578 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 CLDN10P78369 228 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 NOLC1Q14978 699 aaKnown RBP eCLIP18.54■□□□□ 0.56
TPM1-205ENST00000357980 PSMD6Q15008 389 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 MEA1Q16626 185 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 SRGAP1Q7Z6B7 1085 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 ZNF397Q8NF99 534 aaPredicted RBP18.54■□□□□ 0.56
TPM1-205ENST00000357980 DNAJB3Q8WWF6 145 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 CCDC127Q96BQ5 260 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 TNFSF13BQ9Y275 285 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 ANK1P16157 1881 aa18.54■□□□□ 0.56
TPM1-205ENST00000357980 HNRNPH3P31942 346 aaKnown RBP18.53■□□□□ 0.56
TPM1-205ENST00000357980 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPM1-205ENST00000357980 GCLMP48507 274 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 KLHDC7AQ5VTJ3 777 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 TRIM65Q6PJ69 517 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 WDR59Q6PJI9 974 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 USP37Q86T82 979 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 SCLT1Q96NL6 688 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 RRAGDQ9NQL2 400 aaPredicted RBP18.53■□□□□ 0.56
TPM1-205ENST00000357980 FBXL5Q9UKA1 691 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 OGTO15294 1046 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 WNT7BP56706 349 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 POLR2FP61218 127 aaKnown RBP18.53■□□□□ 0.56
TPM1-205ENST00000357980 TMEM62Q0P6H9 643 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 LHX8Q68G74 356 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 ZBTB33Q86T24 672 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 PCSK9Q8NBP7 692 aaKnown RBP18.53■□□□□ 0.56
TPM1-205ENST00000357980 LMO3Q8TAP4 145 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
TPM1-205ENST00000357980 BEGAINQ9BUH8 593 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 TMEM117Q9H0C3 514 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 KCND1Q9NSA2 647 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 PLAGL2Q9UPG8 496 aa18.53■□□□□ 0.56
TPM1-205ENST00000357980 GRIN2DO15399 1336 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 SOWAHDA6NJG2 315 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 TSPAN1O60635 241 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 UCHL3P15374 230 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 GTF2H1P32780 548 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 MXI1P50539 228 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 ZNF568Q3ZCX4 644 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 EPC2Q52LR7 807 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 E4F1Q66K89 784 aaPredicted RBP18.52■□□□□ 0.56
TPM1-205ENST00000357980 TAF2Q6P1X5 1199 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 TCHPQ9BT92 498 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 CDHR5Q9HBB8 845 aa18.52■□□□□ 0.56
TPM1-205ENST00000357980 HMX1Q9NP08 348 aaPredicted RBP18.52■□□□□ 0.56
TPM1-205ENST00000357980 TOPORSQ9NS56 1045 aaPredicted RBP18.52■□□□□ 0.56
TPM1-205ENST00000357980 RBAKQ9NYW8 714 aaPredicted RBP18.52■□□□□ 0.56
TPM1-205ENST00000357980 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
TPM1-205ENST00000357980 HARSP12081 509 aaKnown RBP18.51■□□□□ 0.55
TPM1-205ENST00000357980 ARF4P18085 180 aaPredicted RBP18.51■□□□□ 0.55
TPM1-205ENST00000357980 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
TPM1-205ENST00000357980 PDXDC1Q6P996 788 aa18.51■□□□□ 0.55
TPM1-205ENST00000357980 RRAGAQ7L523 313 aa18.51■□□□□ 0.55
TPM1-205ENST00000357980 CACNA2D4Q7Z3S7 1137 aa18.51■□□□□ 0.55
TPM1-205ENST00000357980 RNF180Q86T96 592 aa18.51■□□□□ 0.55
TPM1-205ENST00000357980 TMTC1Q8IUR5 882 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms