RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 HNRNPDQ14103 355 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 SPA17Q15506 151 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 SPOPLQ6IQ16 392 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 NIPAL1Q6NVV3 410 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 RBM44Q6ZP01 1051 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 ITIH5Q86UX2 942 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 LURAP1LQ8IV03 231 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 CEP63Q96MT8 703 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 KRT12Q99456 494 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
PHACTR3-201ENST00000355648 DKC1O60832 514 aaKnown RBP eCLIP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 TBX10O75333 385 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 PTPN4P29074 926 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 AP3M2P53677 418 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 VWA3BQ502W6 1294 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 FAM117BQ6P1L5 589 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 TUBA3EQ6PEY2 450 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 ALLCQ8N6M5 410 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 SSH3Q8TE77 659 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 EGLN2Q96KS0 407 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 ECSITQ9BQ95 431 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 FGFR1OP2Q9NVK5 253 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 KLHL3Q9UH77 587 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 UTP11Q9Y3A2 253 aaKnown RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.56
PHACTR3-201ENST00000355648 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 RNF113AO15541 343 aaKnown RBP11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 NUDT17P0C025 328 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 OCM2P0CE71 109 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 OCMP0CE72 109 aaPredicted RBP11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 CDH3P22223 829 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 EPHB2P29323 1055 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 HOXD13P35453 343 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 VAC14Q08AM6 782 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 CNGA2Q16280 664 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 PHKG1Q16816 387 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 C6orf118Q5T5N4 469 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 MCM10Q7L590 875 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 CALML6Q8TD86 181 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 ATL1Q8WXF7 558 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 BIRC8Q96P09 236 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 B3GNT4Q9C0J1 378 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 MTFR1LQ9H019 292 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 MRGBPQ9NV56 204 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 DNAJB4Q9UDY4 337 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 PRKAG2Q9UGJ0 569 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 TFR2Q9UP52 801 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 TLL2Q9Y6L7 1015 aa11.52□□□□□ -0.57
PHACTR3-201ENST00000355648 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 TTC26A0AVF1 554 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 HAT1O14929 419 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 OR6B1O95007 311 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 KRT75O95678 551 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 MARCKSP29966 332 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 SCNN1AP37088 669 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 GRIA2P42262 883 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 RPS3AP61247 264 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 KRT31Q15323 416 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 SDCCAG3Q96C92 435 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 SLC7A6OSQ96CW6 309 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 DSEQ9UL01 958 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 DUSP10Q9Y6W6 482 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 A8MXQ7 604 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 CENPBD1B2RD01 187 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 TCP11X1B4DZS4 312 aa11.51□□□□□ -0.57
PHACTR3-201ENST00000355648 AP3B1O00203 1094 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms