RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 PCDHB2Q9Y5E7 798 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PCDHA5Q9Y5H7 936 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 FMN2Q9NZ56 1722 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TMEM114B3SHH9 223 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TCP11X1B4DZS4 312 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 KIF28PB7ZC32 967 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF254O75437 659 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 MTA2O94776 668 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 FARP2O94887 1054 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CCNCP24863 283 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PPP2R5CQ13362 524 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PEX26Q7Z412 305 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF589Q86UQ0 364 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 MAP4K1Q92918 833 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF317Q96PQ6 595 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PAIP1Q9H074 479 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CLIC4Q9Y696 253 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TAF6LQ9Y6J9 622 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 NPHP4O75161 1426 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 SH3PXD2BA1X283 911 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CCRL2O00421 344 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 AFPP02771 609 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ECE1P42892 770 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CLK1P49759 484 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 KRT76Q01546 638 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CCDC58Q4VC31 144 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 LSMEM1Q8N8F7 131 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 PPP4R1Q8TF05 950 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZFPM2Q8WW38 1151 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 HPS1Q92902 700 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 C1orf74Q96LT6 269 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TBC1D10AQ9BXI6 508 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 WNT8AQ9H1J5 351 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 LIN28AQ9H9Z2 209 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TBC1D23Q9NUY8 699 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 USP42Q9H9J4 1324 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 FAM208AQ9UK61 1670 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 RGPD8O14715 1765 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ZMYM6O95789 1325 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 SMIM31A0A1B0GVY4 71 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 HAT1O14929 419 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PFDN6O15212 129 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 UNC5CO95185 931 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PCSK6P29122 969 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 EVI2BP34910 448 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 OCRLQ01968 901 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 MRPL28Q13084 256 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 GSTA3Q16772 222 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TIGD2Q4W5G0 525 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CREG2Q8IUH2 290 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CSGALNACT2Q8N6G5 542 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 Q8N9G6 341 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 OMA1Q96E52 524 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 GRIP2Q9C0E4 1043 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 VPS16Q9H269 839 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ALDH8A1Q9H2A2 487 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 KIAA1586Q9HCI6 787 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 POU2F3Q9UKI9 436 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TNPO2O14787 897 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 KMOO15229 486 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 RNASEH1O60930 286 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PARNO95453 639 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 GYPCP04921 128 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 GFAPP14136 432 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ATP5DP30049 168 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 KRT20P35900 424 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 SLC34A1Q06495 639 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 PDE4DQ08499 809 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 NR1I3Q14994 352 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 NLRP10Q86W26 655 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CCDC25Q86WR0 208 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 NDUFAF2Q8N183 169 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKRD42Q8N9B4 389 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 HERVK_113Q902F9 699 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CIB1Q99828 191 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 CNNM2Q9H8M5 875 aa9.48□□□□□ -0.89
RBFOX1-203ENST00000355637 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms