RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 B3GALT6Q96L58 329 aa17.63■□□□□ 0.41
PDGFA-201ENST00000354513 RXFP1Q9HBX9 757 aa17.63■□□□□ 0.41
PDGFA-201ENST00000354513 BRMS1Q9HCU9 246 aa17.63■□□□□ 0.41
PDGFA-201ENST00000354513 UBN1Q9NPG3 1134 aa17.63■□□□□ 0.41
PDGFA-201ENST00000354513 MRPL17Q9NRX2 175 aaKnown RBP17.63■□□□□ 0.41
PDGFA-201ENST00000354513 VPS13AQ96RL7 3174 aa17.63■□□□□ 0.41
PDGFA-201ENST00000354513 ZMYM2Q9UBW7 1377 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
PDGFA-201ENST00000354513 MED24O75448 989 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 SEC24BO95487 1268 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 NPTXRO95502 500 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 URODP06132 367 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 AKAP5P24588 427 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 DSG1Q02413 1049 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 TFDP1Q14186 410 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 TMEM87AQ8NBN3 555 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 CMASQ8NFW8 434 aaPredicted RBP17.62■□□□□ 0.41
PDGFA-201ENST00000354513 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 GPR62Q9BZJ7 368 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 CXCL16Q9H2A7 254 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 STK39Q9UEW8 545 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 GIT1Q9Y2X7 761 aa17.62■□□□□ 0.41
PDGFA-201ENST00000354513 A0A1B0GUA9 196 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 GLUD2P49448 558 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
PDGFA-201ENST00000354513 POTEGQ6S5H5 508 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 C15orf39Q6ZRI6 1047 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 CCDC149Q6ZUS6 474 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 PLCD3Q8N3E9 789 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 RABGGTAQ92696 567 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 ZNF707Q96C28 371 aaPredicted RBP17.61■□□□□ 0.41
PDGFA-201ENST00000354513 PAAF1Q9BRP4 392 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 KLK14Q9P0G3 267 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 COL4A3Q01955 1670 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 CFAP54Q96N23 3096 aa17.61■□□□□ 0.41
PDGFA-201ENST00000354513 GALR2O43603 387 aaPredicted RBP17.6■□□□□ 0.41
PDGFA-201ENST00000354513 RFPL2O75678 378 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 MYBP10242 640 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 FUT10Q6P4F1 479 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 SLC27A1Q6PCB7 646 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 MAEAQ7L5Y9 396 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 MYH11P35749 1972 aa17.6■□□□□ 0.41
PDGFA-201ENST00000354513 CACNA1HO95180 2353 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 H0Y858 1186 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDGFA-201ENST00000354513 NPR3P17342 541 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 MCM7P33993 719 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 NEK4P51957 841 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 GRIK3Q13003 919 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 NAB2Q15742 525 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 RHOBTB2Q9BYZ6 727 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 CCDC113Q9H0I3 377 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 FZD8Q9H461 694 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 TUFT1Q9NNX1 390 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 USP20Q9Y2K6 914 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 CITO14578 2027 aa17.59■□□□□ 0.41
PDGFA-201ENST00000354513 CLUHO75153 1309 aa17.58■□□□□ 0.41
PDGFA-201ENST00000354513 CCDC195A0A1B0GUA6 201 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 LRRIQ4A6NIV6 560 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 PTGESO14684 152 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 NARSO43776 548 aaKnown RBP17.58■□□□□ 0.4
PDGFA-201ENST00000354513 GLUD1P00367 558 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 ADH1AP07327 375 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 SPATA31D3P0C874 917 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 NUBP1P53384 320 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 FAM187BQ17R55 369 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 LILRA6Q6PI73 481 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 SPATA31D4Q6ZUB0 917 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 OTOP3Q7RTS5 596 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 MYADMQ96S97 322 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.4
PDGFA-201ENST00000354513 PDZD7Q9H5P4 517 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 KCNK12Q9HB15 430 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 WDR6Q9NNW5 1121 aaKnown RBP17.58■□□□□ 0.4
PDGFA-201ENST00000354513 ADAM28Q9UKQ2 775 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 DUSP12Q9UNI6 340 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 PATJQ8NI35 1801 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 MIA3Q5JRA6 1907 aa17.58■□□□□ 0.4
PDGFA-201ENST00000354513 RPL17P18621 184 aaKnown RBP17.57■□□□□ 0.4
PDGFA-201ENST00000354513 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 TDGQ13569 410 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 ECM1Q16610 540 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 RTP2Q5QGT7 225 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 ASTLQ6HA08 431 aaPredicted RBP17.57■□□□□ 0.4
PDGFA-201ENST00000354513 RSAD2Q8WXG1 361 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
PDGFA-201ENST00000354513 PRIMPOLQ96LW4 560 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 CCDC43Q96MW1 224 aaKnown RBP17.57■□□□□ 0.4
PDGFA-201ENST00000354513 POLR3CQ9BUI4 534 aaPredicted RBP17.57■□□□□ 0.4
PDGFA-201ENST00000354513 COLEC11Q9BWP8 271 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 SSX2IPQ9Y2D8 614 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 FANCMQ8IYD8 2048 aa17.57■□□□□ 0.4
PDGFA-201ENST00000354513 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 TGM5O43548 720 aa17.56■□□□□ 0.4
PDGFA-201ENST00000354513 IGFBP6P24592 240 aaPredicted RBP17.56■□□□□ 0.4
PDGFA-201ENST00000354513 EEF1DP3Q658K8 133 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms