RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 RAD17O75943 681 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 SAT1P21673 171 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 MAP4P27816 1152 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 MAPK4P31152 587 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 BLMHQ13867 455 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 UBE2SQ16763 222 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CCDC14Q49A88 953 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 C1orf54Q8WWF1 131 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 DDX25Q9UHL0 483 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 SPATA31A5Q5VU36 1347 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 SPATA31A7Q8IWB4 1347 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CHRNA3P32297 505 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 PTDSS1P48651 473 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 GALNT17Q6IS24 598 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 TPH2Q8IWU9 490 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 CNBD2Q96M20 576 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CSRNP1Q96S65 589 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 SPC25Q9HBM1 224 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 ASAP2O43150 1006 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CDH16O75309 829 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
COG3-201ENST00000349995 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CAAP1Q9H8G2 361 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 RNF103-CHMP3A0A140T963 221 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 KRT16P08779 473 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 IL1RL1Q01638 556 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 XRCC4Q13426 336 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 ABCB5Q2M3G0 1257 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 PDXDC1Q6P996 788 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 ZNF507Q8TCN5 953 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 CEP95Q96GE4 821 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
COG3-201ENST00000349995 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 WTIPA6NIX2 430 aaPredicted RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 ENTPD5O75356 428 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 DAB1O75553 588 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 FCER1AP12319 257 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 UBXN2AP68543 259 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ATG16L1Q676U5 607 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 TRIM11Q96F44 468 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 UNC45AQ9H3U1 944 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ANKFY1Q9P2R3 1169 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 A8MUI8 341 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 COPEO14579 308 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 GPC4O75487 556 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 KCNJ1P48048 391 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 SNAP25P60880 206 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 RPS6KA2Q15349 733 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 CNKSR1Q969H4 720 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 EPAS1Q99814 870 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 USP17L5A8MUK1 530 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 TTC4O95801 387 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 KRT8P05787 483 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 RAB27AP51159 221 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 KCTD19Q17RG1 926 aaPredicted RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 NSL1Q96IY1 281 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 SH3GL2Q99962 352 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 ERP44Q9BS26 406 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 PAIP1Q9H074 479 aaKnown RBP16.05■□□□□ 0.16
COG3-201ENST00000349995 GID8Q9NWU2 228 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 DCCP43146 1447 aa16.05■□□□□ 0.16
COG3-201ENST00000349995 RASSF9O75901 435 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 CBX6O95503 412 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 IFI35P80217 286 aaPredicted RBP16.04■□□□□ 0.16
COG3-201ENST00000349995 NR1H3Q13133 447 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 CEP55Q53EZ4 464 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 TRIM50Q86XT4 487 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 FAM192AQ9GZU8 254 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 R3HDM2Q9Y2K5 976 aaKnown RBP16.04■□□□□ 0.16
COG3-201ENST00000349995 E2F6O75461 281 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 DYNLT1P63172 113 aa16.04■□□□□ 0.16
COG3-201ENST00000349995 DCTN2Q13561 401 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms